Clarias gariepinus (North African catfish): 128514289
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Entry
128514289 CDS
T10780
Symbol
cdx1a
Name
(RefSeq) homeobox protein CDX-1a
KO
K09312
homeobox protein CDX1/4
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128514289 (cdx1a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
128514289 (cdx1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Caudal_act
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
128514289
NCBI-ProteinID:
XP_053344048
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All DBs
Position
2:complement(15413748..15421909)
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AA seq
256 aa
AA seq
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MSVSYLLERDGGGGAMYSNPTRHVNLGYGHQNVYPSPPYSDYTGYHHVSAVGNEHHHGAQ
SGGAWNPVYAPAHDEWPLYAHGATHAPFPSLGPVNAGNVSGLVAPQEQRSLTNVPGPPQL
SPISERDQAEWARRTGSQASTGGKTRTKDKYRVVYSDHQRLELEKEFHFSRYITIRRKAE
LAVTLNLSERQVKIWFQNRRAKERKLNRKKIQQSQQASTTTATPPAVDMHANAAIVASTS
GSLLTDTLSTVIKEEY
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgagctacctgttggaaagggacggcggcggcggcgcgatgtacagcaacccc
acgcggcacgtcaacctcggctacggccaccagaacgtgtacccgtcgccgccgtactcg
gactacaccggctaccatcacgtctcggccgtggggaacgagcaccaccacggagcgcag
agcggcggcgcgtggaatcccgtttacgcgcccgcgcacgacgagtggccgctttacgcg
cacggcgccacgcacgcgcccttcccgagcctcgggccagtgaacgcggggaacgtcagc
ggcctggtggccccgcaggagcaacgcagcttgaccaatgtccccggtcctcctcagctg
tcccccatctctgagagggaccaggccgagtgggccaggcgcacaggatcacaagcgagc
acaggaggaaagacaaggacaaaggacaagtaccgggtggtgtacagtgaccaccagcgc
ctagagctcgagaaagaattccacttcagccgctacatcaccatcagacggaaggcagag
ctcgccgtgactctcaacctctccgaacgccaggtaaagatctggtttcagaacagacgt
gctaaagagaggaagctgaacaggaagaagatccagcagtcgcagcaggcctcgaccacc
acggccactccgccagcggtcgatatgcatgcaaacgctgctatagtcgcaagcaccagc
ggcagcctattgacagacacgttatctacggttattaaagaagaatactaa
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