Clarias gariepinus (North African catfish): 128514354
Help
Entry
128514354 CDS
T10780
Symbol
amfra
Name
(RefSeq) autocrine motility factor receptor a
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04137
Mitophagy - animal
cgar04141
Protein processing in endoplasmic reticulum
Brite
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
128514354 (amfra)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128514354 (amfra)
Multi subunit type E3
ERAD complex
128514354 (amfra)
LMBR1L-GP78-UBAC2 complex
128514354 (amfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128514354
NCBI-ProteinID:
XP_053344147
LinkDB
All DBs
Position
2:22591868..22600705
Genome browser
AA seq
641 aa
AA seq
DB search
MPLVFLERFPWPSLQTYTALSAVLLAGTLLSAYTAVTEPEAPAAEETPSTSTDSNKIKQA
DTEGNVAANILLFLISDSLFVWVLVNTACCVLMLIAKVIQCIVFGPLRVSEKRHLKDKFW
NFIFYKFIFIFGVLNVQTVEEVVLWCLWFAVLIFLHLMVQLCKDRFEYLSFSPTTPMSSH
VRVLALLVSMLLCCGGLAVLCGLVGHFHGMHTVAFMAAECLLVTVRTGHVITRYSIHLWD
LNHEGTWESKGTYVYYTDFIMELTLLCLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFH
EVQRRIRRHKNYLRVIDNMESRFAVATTDELVANNDDCAICWDSMTSARKLPCGHLFHSS
CLRSWLEQDTSCPTCRMSLNINEGERERGEGQRAPADNMATGPGNDVRPHLNQHNHFFHF
DGSRIASWLPSFSVEVMHTTNILGIAQVNNSQLSAMAHQIQEMFPQVPYHLVLQDLQLTR
SVEVTTDNILEGRIQVPFPAQPVERASIQVNPVSEEPVGASGGSEPTTVETEDLEVRGSR
FSKSADERQRMLHQRKEELLQRARRRYLNKSNVEEVSFSNFAASKYDDDDDDEEEDEEEN
DDNDPPSLEEEDSSSDPVTIRRRMLAAAAEQRMHRQADTPI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcctctagtgtttctggagaggtttccttggcccagtttgcagacttacaccgccctg
agtgcagtgctgctggctgggactttgttaagcgcctacacagctgtgaccgagcctgaa
gctccagctgctgaagaaactccgagcacctccacagacagcaataaaatcaagcaagct
gacactgagggaaatgtggctgcaaatatactgctctttctcatctctgacagcctattc
gtttgggttttggtgaataccgcatgctgtgtcctcatgctgattgccaaggtgatccag
tgcattgtttttggtcctctgagggtcagtgagaaacggcacttgaaggacaaattctgg
aacttcatcttctataaattcatcttcatatttggggtgctgaatgtgcagaccgtagaa
gaggtggttttgtggtgtctgtggtttgctgttctaatcttccttcatctcatggtccag
ctctgtaaagatcgctttgaatatctgtctttttctccaacaacccccatgagcagtcat
gtgcgagtactggccctgctggtatccatgctgctgtgctgtggaggtttagctgtgctc
tgtggcctcgtcggtcatttccatggcatgcatactgttgcctttatggctgctgagtgt
ttacttgttacagtgcgcactggacatgttattacgaggtactcgattcacttatgggac
ttgaaccatgaaggcacctgggagagcaaaggcacctatgtctactatactgactttatt
atggagcttaccctcctttgccttgatctgatgcatcacattcatatgctgctctttgga
aatatctggctgtcaatggccagcttggtgatctttatgcagcttcgctacctcttccat
gaggtgcagaggagaatccgtcggcacaagaactacttgcgtgtcattgacaatatggag
tccagatttgcagtcgccaccacagatgagcttgttgccaataatgatgactgtgcaatc
tgctgggactccatgacctcagcacggaagctgccctgcggccaccttttccatagctca
tgtctgcgctcatggctagagcaggacacctcctgtccaacgtgccgcatgtcactgaac
attaatgagggcgagagagagagaggggaggggcagagggcaccagctgacaacatggct
acagggcctgggaatgatgtccgtcctcacctgaaccagcacaaccacttcttccatttt
gatggttcacgaattgctagctggctcccaagcttctctgtggaagttatgcacacaacc
aacattttgggcatcgcacaagtcaacaactcgcagctcagcgccatggcccatcagata
caggagatgttcccccaggttccttaccatctggtgctgcaagatttgcaactcactcgc
tctgtggaggtcaccactgacaacatcctggaaggcagaatccaggtgcccttccctgct
cagcccgtggaacgagcatccattcaggttaacccagtctcagaggagcctgtgggagct
agtgggggttcagagcccactactgtggagacggaggaccttgaggtgcgtggcagccgc
ttctcaaaatctgcagatgagaggcagagaatgctgcaccaaaggaaggaggagctgctg
caaagagcacgcagacgctatctaaacaaaagcaatgtagaagaagtgtctttttccaac
tttgctgcttccaaatatgatgatgatgatgatgatgaggaggaggatgaagaggagaat
gatgataatgacccaccctctcttgaagaagaggattccagttcagaccctgtgaccatt
cgccgaaggatgttggcagctgcagccgaacaacgcatgcacagacaggcagacacaccc
atctga
DBGET
integrated database retrieval system
