Clarias gariepinus (North African catfish): 128514473
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Entry
128514473 CDS
T10780
Symbol
myd88
Name
(RefSeq) myeloid differentiation primary response protein MyD88
KO
K04729
myeloid differentiation primary response protein MyD88
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04620
Toll-like receptor signaling pathway
cgar04621
NOD-like receptor signaling pathway
cgar05132
Salmonella infection
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128514473 (myd88)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128514473 (myd88)
04621 NOD-like receptor signaling pathway
128514473 (myd88)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128514473 (myd88)
09171 Infectious disease: bacterial
05132 Salmonella infection
128514473 (myd88)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR_2
Death
TIR
DAB2P_C
Motif
Other DBs
NCBI-GeneID:
128514473
NCBI-ProteinID:
XP_053344317
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All DBs
Position
26:complement(20873336..20878541)
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AA seq
290 aa
AA seq
DB search
MSSATDSSSTSSSSSSSSSLDYESIPVTALNYGVRKKLGLYLNPTNTVAADWTDIAEKME
FTYLEIKNYEKRENPMQKLLEDWQTRVEASVARLLGFLEQTDRKDIISDLKPLIDDDCRK
YLERQKDLPVQVPEVDSRQLDRGITINDGHTPETFDAFICYCQSDFQFVHEMIRQLEQTD
YNLKLCVFDRDVLPGTCVWTITSELIERRCKRMVVVISDDYLDSDACDFQTKFALSLCPG
ARTKRLIPVIYKPMKRQFPSILRFLTVCDYTRPCTQSWFWVRLAKALSQP
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagcaacagactcatcgtccacctcatcctcatcttcctcctcatcatctctg
gactatgagtcgattccagtcacagctctgaactacggcgtgaggaagaaactgggtctg
tacttaaaccccactaacacggtggccgcagactggacggacatcgcggagaaaatggag
ttcacctacctggagattaaaaactacgagaagcgagagaatcccatgcagaagctgctg
gaggactggcagacccgagtggaggcctcggtggccagactgctgggcttcctggagcag
acagacaggaaggacatcatctcggacctcaaaccactcatagatgatgactgcaggaag
tacttagagaggcaaaaggatcttcctgtccaggtccctgaggtggacagcaggcaactg
gatcgaggcataaccataaacgatggtcacacgccggagaccttcgatgctttcatatgc
tactgccagagtgacttccagtttgtccacgagatgatccgacagctggagcagaccgat
tacaacctaaagctgtgcgtgtttgaccgcgacgtccttcccgggacgtgtgtgtggacc
atcaccagcgagctcatcgagaggaggtgcaagaggatggtggtggtaatttctgatgat
tacttggacagcgatgcctgtgacttccagactaaatttgctctcagcctttgcccaggg
gctcgcaccaaacggctgattcctgtgatctacaagcccatgaagcggcagttccccagc
atcctgcgcttcctcacagtgtgcgactacaccaggccgtgcacacagtcctggttctgg
gttcgactagccaaagccttgtcccagccctga
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