Clarias gariepinus (North African catfish): 128514489
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Entry
128514489 CDS
T10780
Symbol
pan3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128514489 (pan3)
mRNA degradation factors
3'-5' decay
Pan complex
128514489 (pan3)
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GFIT
Other DBs
NCBI-GeneID:
128514489
NCBI-ProteinID:
XP_053344339
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Position
26:22018518..22036764
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AA seq
796 aa
AA seq
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MNSGLPVSAAPLGGVVIPGVKVKFCRYYAKDKTCFYGDDCQFLHEDPSAAVHGGGSGGSP
VTLALPGGAVSAAAAAAVAGYPPCPSGAPAGVPKKTDALGPAGAALDGQLLSMTGMDSVA
LSDANLTNSYFSSSFIGVNGFGSPAESKYSMMQRMTSSSSSPSLLNDGAKNFSHSAHDPV
SSPTSSLFSDFGALSITQRRKAPNPAATEFIPKGAPRMSTMSQAAVPTFPSPLFPHPGLS
GSAAAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPNPPNYMVPTTASDPGGAA
HIIQKETVGGTTYFYTDNTPAPMAGMVFPTYHIYPQTAPHVAYMQPKANAPSFFMADELR
QELINRHLITMAQIDQSENPGVPSEVDSYHSLFPLEPLLPPNRLQKTSKFSYITSCYKAV
NSKDDLPYCLRRIHGFRLVNTKCMMLVDMWKKIQHSNAVTLREVFTTKAFGDHSLVFSYD
FHAGAETMYSRHFNDPTADSYFTKRKWGPHEPPPPRQHAGLLPESLIWAYIVQLSSALRT
IHTAGLACRVMDPSKILITGKTRLRVNCVGVFDVLTFDNSQSNHLALMPQYQQADLISLG
KVVLALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLTEQSRLRSVNDIMPMIGA
RFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLL
KLFRDHLFHQVTEAGTPWVDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVVTYSDLKRC
FDSTFQELLAAANGSL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcggactcccggtctcggctgctccgctcggcggtgtcgtaataccgggcgtc
aaggtgaagttctgccgctattacgcgaaagacaagacttgcttttatggcgacgactgc
cagttcctgcacgaggacccgtccgcggctgtgcacggaggaggaagcggcggcagcccg
gtgactttagctctccccggcggggcagtgagcgcggcggcggcggcggcagtagcgggc
tatccgccgtgcccgagcggagccccagcgggtgtccccaaaaagactgatgctctcggg
cctgcaggagcagctctggacggccagttgttgagcatgacagggatggacagtgtggcg
ctcagcgatgcgaatctgaccaactcctatttcagcagcagctttattggagtcaatggc
tttggaagcccagcagagtccaaatactcaatgatgcagaggatgaccagcagcagcagc
tccccaagtctccttaatgacggtgccaagaatttcagccacagtgctcatgatcctgtc
agttctcccacttcctccctgtttagtgattttggtgctttaagcataacacagaggaga
aaggctcctaatcctgctgccacagagttcatccctaaaggagcaccacgcatgtctacc
atgtctcaggcggccgtaccgacgtttccctcgcctctcttcccccatcccgggctgagc
ggctccgccgcagcgggactcgcacctggtatgtctttgtctgctgggtcgtctcctctg
cactcgcccaaaatcactccccatacgtcacccgccccccggcgccgtagccacacccct
aaccccaacccacccaattacatggtgcccacaacggcgtctgacccgggaggcgccgcc
cacatcatccaaaaggagactgtaggtggaaccacctacttctacaccgataacacgcct
gctcccatggctggaatggtgtttccaacataccatatctacccacaaactgcacctcat
gtggcgtacatgcagcccaaagctaacgctccatccttctttatggctgatgagctcaga
caggagttgattaacaggcatttgataacgatggcccaaatcgatcagtctgagaaccca
ggagtcccatctgaggtggacagctaccacagcctctttcccctggagcctcttctgcct
cctaaccgcctacagaaaaccagcaaattcagttacatcacttcctgttataaggcggtg
aacagcaaagatgaccttccttactgtctcaggaggatacatggcttcaggctggtgaac
accaagtgcatgatgctggtcgacatgtggaagaagatccagcactccaacgccgtcaca
ctgcgagaagtcttcaccaccaaggctttcggagatcactcgttggtgttctcgtacgac
ttccacgccggggctgagaccatgtacagcaggcacttcaacgacccgacagctgactct
tattttaccaagaggaagtggggtccacatgagcctcctcctcctcggcagcatgccggt
ctgctgcccgagtctctgatctgggcctacatcgtgcagctaagctcggccctgcgcacc
atccacaccgccggcctggcctgcagggtcatggaccccagcaagatcctcatcactgga
aaaactcggttacgggtgaactgtgtaggagtgtttgatgtcttaacgtttgacaacagt
cagagcaaccacttggcactcatgccccagtaccagcaggcggatctgatctctctgggg
aaggtggtgttggcgctcgcctgtaactctctggctggtattcagagagagaacctgcag
aaagccatggagctcgtgtccatcaactactcatccgacctcaagaacctcatcctgtac
ctgcttacagagcagagtcgcctgcgcagcgtcaatgacatcatgcccatgattggagcc
agattttacactcaactggacgcttcacagatgagaaatgacgtcattgaagaggatctg
gccaaggaggtgcagaacggacgcttattccgccttctggccaaactgggaaccatcaat
gagcgaccagagttccagaaggatcccacatggtctgagaccggagatcgctacctgctg
aagctcttcagagatcacctgttccaccaggtgactgaggcaggcacgccctgggtggac
ctgagccacatcgtgtcttgtcttaataaactggacgccggagtgcctgagaagatcagc
ctggtgtctcgggatgagaagagcgtcctggtggtgacctactcagacctgaagcgctgc
ttcgacagcaccttccaggaactgctggctgccgccaacggctcgctgtag
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