Clarias gariepinus (North African catfish): 128514616
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Entry
128514616 CDS
T10780
Name
(RefSeq) proteasome subunit alpha type-6-like
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
128514616
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgar01002
]
128514616
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cgar03051
]
128514616
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
128514616
Peptidases and inhibitors [BR:
cgar01002
]
Threonine peptidases
Family T1: proteasome family
128514616
Proteasome [BR:
cgar03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
128514616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
128514616
NCBI-ProteinID:
XP_053344381
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All DBs
Position
27:22839773..22844792
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AA seq
246 aa
AA seq
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MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAIVVTQKKVPDKL
LDASTVTHLFRITDNIGCVMSGMTADSRSQVQRARYEAANWMYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMIVIGVDEEFGPQVYKCDPAGYYCGFKATAAGVKQTEAISFLE
KKVKKKHDWSFEQTMETAISCLSTVLSIDFKPSELEVGVITTQEPRFRILSEAEVDAHLV
SLSERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcggctcgagcgcagggtttgatcgccacatcacgatcttctcaccggaggga
cgactttaccaagtggaatatgcgtttaaggcgattaatcagggcggcctgacgtcggtg
gccgtgcgggggaaagactgcgccatcgtcgtcacacagaaaaaagtcccggacaagctc
ctggacgcctctacagtcacacacctgttccgcatcacagacaacatcggctgtgtgatg
tcgggcatgactgccgacagtaggtctcaggtgcagagggcgcgttacgaagcggcgaac
tggatgtacaagtacgggtacgagatcccggtcgacatgctgtgtaagaggatcgccgac
atctcacaggtgtacacacagaacgctgagatgagaccgctcggctgctgtatgatcgtg
atcggggtggatgaggagttcgggccccaggtgtataaatgcgaccctgcaggttattac
tgcggcttcaaggccacagcggccggagtgaaacagactgaagccatcagcttcctggag
aagaaagtcaagaagaaacacgactggagcttcgagcagaccatggagacggcgatcagc
tgcttgtccacggttctgtccatcgacttcaagccgtcggagctggaggtgggagtgatc
acgacacaggagcctcgcttcaggatcctgtccgaggccgaggtggacgctcacctggtg
tctctgtctgagagagactaa
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integrated database retrieval system
