Clarias gariepinus (North African catfish): 128514658
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Entry
128514658 CDS
T10780
Symbol
sox11b
Name
(RefSeq) transcription factor SOX-11b
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128514658 (sox11b)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128514658 (sox11b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
NOA36
Astro_capsid_p
Nucleo_P87
TFB6
DNA_pol_phi
Voldacs
Motif
Other DBs
NCBI-GeneID:
128514658
NCBI-ProteinID:
XP_053344426
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Position
27:complement(11189603..11191977)
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AA seq
387 aa
AA seq
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MVQQTEHSETESGASREATDTEETEMGVCSPVPPKPDWCRTATGHIKRPMNAFMVWSKIE
RRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLQHMADYPDYKYRPKKK
PKLDNSSKPGALSPEKNGNKAVKAAAKSKCTKMKTSKPGGAGVTARAAQDVRCGYAFTNF
KVSKSVKRELTDDEDDDEDDDDDDEDDYDDESPVRFKAEDDEEHLRPYGVAKVPASPTLS
SAAESEGASMYEELSGRATNATAGSRLFYSFKNITKQQQQQPHHTSRPSALSPAPSFRSA
SISSSSCGEDADDLLVDFSLNLAAGGEPTSQASGNLCLSLVDKDLDSFSEGSLSSHFEFP
DYCTPELSEMIAGDWLEANFSDLVFTY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggtacagcaaactgagcacagcgagacggagagcggcgcgtcccgcgaggccacggac
acggaggaaactgaaatgggcgtctgcagccccgtgccgccaaaaccggactggtgccgg
accgccaccggccacatcaagaggcccatgaacgcgttcatggtgtggtcgaagatcgag
cggaggaagatcatggagcagtctccggacatgcacaacgccgagatctccaaaagactc
ggcaagcgctggaaaatgctgaaggacagcgagaagatcccgttcatccgtgaagcagag
cggctgcgcctgcagcacatggctgactacccagactacaagtacagaccgaagaagaag
ccaaagctggacaactcctccaaaccgggcgcgctgtcgccggagaaaaacggcaacaag
gctgtcaaagccgccgccaagtcaaagtgcacgaagatgaagaccagcaaaccggggggc
gccggcgtcaccgcgagagcagcgcaagacgtccggtgcggctacgcgttcacgaacttc
aaagtcagcaagtcggtcaagagggaacttacagacgacgaagacgacgatgaagatgac
gacgacgacgatgaggacgactacgatgacgagtctccggtgcgctttaaagccgaggac
gacgaggagcacctgaggccgtacggtgtggccaaagtgccggcgagtcccacgctgagc
tcagccgcggagtcggagggcgcgagcatgtacgaggagttgtccgggcgcgcaacaaac
gcaacagccggctccagacttttttacagcttcaagaacatcacaaagcagcagcagcag
cagccgcaccacacgagccgaccgtctgcgctctcgccggcaccgtcctttcgctcggcg
tctatctcgtcgtcatcgtgcggcgaggacgcggacgacttgctggtcgactttagcttg
aacttggcggcgggcggagagccgaccagccaggcttcagggaacttgtgcctgtctctg
gtggataaggacttggactcgttcagcgagggcagcctcagctcccacttcgagttcccg
gactactgcacgccagaactgagcgagatgatcgcaggggactggcttgaggccaacttc
tccgacttggtgttcacctactaa
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