KEGG   Clarias gariepinus (North African catfish): 128514658
Entry
128514658         CDS       T10780                                 
Symbol
sox11b
Name
(RefSeq) transcription factor SOX-11b
  KO
K09268  transcription factor SOX11/12 (SOX group C)
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cgar03000]
    128514658 (sox11b)
Transcription factors [BR:cgar03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    128514658 (sox11b)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 NOA36 Astro_capsid_p Nucleo_P87 TFB6 DNA_pol_phi Voldacs
Other DBs
NCBI-GeneID: 128514658
NCBI-ProteinID: XP_053344426
LinkDB
Position
27:complement(11189603..11191977)
AA seq 387 aa
MVQQTEHSETESGASREATDTEETEMGVCSPVPPKPDWCRTATGHIKRPMNAFMVWSKIE
RRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLQHMADYPDYKYRPKKK
PKLDNSSKPGALSPEKNGNKAVKAAAKSKCTKMKTSKPGGAGVTARAAQDVRCGYAFTNF
KVSKSVKRELTDDEDDDEDDDDDDEDDYDDESPVRFKAEDDEEHLRPYGVAKVPASPTLS
SAAESEGASMYEELSGRATNATAGSRLFYSFKNITKQQQQQPHHTSRPSALSPAPSFRSA
SISSSSCGEDADDLLVDFSLNLAAGGEPTSQASGNLCLSLVDKDLDSFSEGSLSSHFEFP
DYCTPELSEMIAGDWLEANFSDLVFTY
NT seq 1164 nt   +upstreamnt  +downstreamnt
atggtacagcaaactgagcacagcgagacggagagcggcgcgtcccgcgaggccacggac
acggaggaaactgaaatgggcgtctgcagccccgtgccgccaaaaccggactggtgccgg
accgccaccggccacatcaagaggcccatgaacgcgttcatggtgtggtcgaagatcgag
cggaggaagatcatggagcagtctccggacatgcacaacgccgagatctccaaaagactc
ggcaagcgctggaaaatgctgaaggacagcgagaagatcccgttcatccgtgaagcagag
cggctgcgcctgcagcacatggctgactacccagactacaagtacagaccgaagaagaag
ccaaagctggacaactcctccaaaccgggcgcgctgtcgccggagaaaaacggcaacaag
gctgtcaaagccgccgccaagtcaaagtgcacgaagatgaagaccagcaaaccggggggc
gccggcgtcaccgcgagagcagcgcaagacgtccggtgcggctacgcgttcacgaacttc
aaagtcagcaagtcggtcaagagggaacttacagacgacgaagacgacgatgaagatgac
gacgacgacgatgaggacgactacgatgacgagtctccggtgcgctttaaagccgaggac
gacgaggagcacctgaggccgtacggtgtggccaaagtgccggcgagtcccacgctgagc
tcagccgcggagtcggagggcgcgagcatgtacgaggagttgtccgggcgcgcaacaaac
gcaacagccggctccagacttttttacagcttcaagaacatcacaaagcagcagcagcag
cagccgcaccacacgagccgaccgtctgcgctctcgccggcaccgtcctttcgctcggcg
tctatctcgtcgtcatcgtgcggcgaggacgcggacgacttgctggtcgactttagcttg
aacttggcggcgggcggagagccgaccagccaggcttcagggaacttgtgcctgtctctg
gtggataaggacttggactcgttcagcgagggcagcctcagctcccacttcgagttcccg
gactactgcacgccagaactgagcgagatgatcgcaggggactggcttgaggccaacttc
tccgacttggtgttcacctactaa

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