Clarias gariepinus (North African catfish): 128514720
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Entry
128514720 CDS
T10780
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgar01002
]
128514720 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128514720 (usp24)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128514720 (usp24)
Peptidases and inhibitors [BR:
cgar01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128514720 (usp24)
Ubiquitin system [BR:
cgar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128514720 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
Motif
Other DBs
NCBI-GeneID:
128514720
NCBI-ProteinID:
XP_053344522
LinkDB
All DBs
Position
27:5268727..5339147
Genome browser
AA seq
2636 aa
AA seq
DB search
METEEEQHMTTLLCMGFPDPVAIRKALRLAKNDINEAVAFLTNESPGLGFGYEPMESGPS
PGSGPGGDRDTSGRTGSGSGGFDPPPAYHDVVEGERANDENGNCSGGNMEFPTTNLYELE
SRVFTDHWSIPYKREESLGKCLIASTSLARMGLADADENCKRFMDRCMPEAFKKLLMSSA
VHKWGTEIHEGIYNMLMLLVDLVAERVKQDPIPIGLMGVLTMAFNPDNEYHFKNRMKASQ
RNWAEVFGEDSMFAVSPSSSYQKFISLLNSVRKQEPHGWLVDLVNRFGEMGGFTAIQTKL
NQDEMEIGCVSALVQPLGVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSI
PDLLSAIKLLCMRFQRELVNVVDDLRLDILLRMLKTPHFSAKMNSLKEVTKLIEESTVSK
TVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSKIWKI
QSGQSSTVIENIHTIIAAAAVKFNCEQLNHLFVLIQKSWEIETDRVRQKLLSLIGKIGRE
ARSETTTGKVLEVLWELAHLPTLPTTLVQQALEEHLTILSDAYAVKETVKKSYIIKCIED
IKKIQIQEDSKSTSEIQVSFFSGSWGKKKPAWAKSSQQSNPQSVWVVPALRQLHEITRSF
IKQTYQKQDKSIIQDLKKNFEIVKLITGSLVACHRLAVTAAGPSGLCGSILVDGRYSYQE
YLEGHLKFLAFFLQEASLYLVWNRAKEIWECLVSGMDVCELDREMCFEWFTKGQHDLESD
VQQQLFKEKILKLEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLIGMDFI
WRIAMESPDEDIANEAIQLIILYSYLNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGG
PTLTHAVTRATKMLTATAMPTVATSVQSPSRSTKLVIIERLLLLAERYVITIEDLYSVPR
TILPHGASFNGHPVTLHITYESTKDTFSLEAHSNETVGSIRWKIAEQLSCPVDNVQIFAN
DSMLTMNRDQKLLNQLGFSDEQSLTVKSSGTGTPSGSSADSSASASSSSSGVFNSAYALE
QEKSLPGVVMALVCNVFEMLYQLANLEEPRITLRVRKLLLLIPTDPEVQDALDNFVPKES
SVWSHQKTLFTLGSGSQASKSPSLSSKQQHQQSAASILESLFRSSAPGMSTFRVLYNLEV
LSSKLMPTSDDEMAKTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICL
QLARFLLVGQTMPSILDEELNKDGVDTLSSRPFRNAGRQSSRQLSLCGTPEKSSYRQMSM
SDRSSIRVEEIIPAARVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSSQPIRETTN
SLLPQGVRSRVSSTGSNCSSSSEGEATTLQAGICVKQQCVSIKDTIIAREALSLLVTCLQ
LRCQQLSSFYNLPCVNDFIIDILLGSPSGEIRRVASDQLYTLSQSDTSAYPELQKPNLFL
LKVVLTAQLPLWSPTSVMRGINQRLLSQCTEYFDLRCQLLDDLTNTEMEQLQISPAAMLE
DEISWLDNFEPTWTSELETSEADNILQAGHLRLIKTLLSLCGNEKEQFGPSLIQQLLDDF
LFRASRIILNSNNPSSSTAPLHDFHPKCSTVSSRLAAYEVLVMLADSSISNLQLITRELL
SMHHQADPSLSKEFDFLPPVDGRSISGFVGLKNGGATCYMNAVFQQLYMQPGLPEAILSI
EDDTENPEESVFCQVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTS
LVDQLDEHLKKIGREQLFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEI
SLDQFVRGEVLEGSNAYYCEKCKEKRTTVKRTCIKSLPSVLVIHLMRFGFDWESGRSIKY
DEQIRFPWVLNMEPYTVSGMARQDSSSDHGENSRVGEPGSGGSPRKKVTISENYELVGVV
VHSGQAHAGHYYSFIKDRRGSSRSRWYKFNDNVVEEFEMNDETLEYECFGGEYRPKVYDQ
SNPYPDVRRRYWNAYMLFYQRISEQNSPVLPKKSRVSVMRQEAEDLSLSAPSSPDISPQS
SPRPPRANNDRLTLLTRLVRKGEKKGLFVEKMPARIFQMVRDENLKFMKNRDVYNSDYFN
FTLSLASVNSTKLKHQSYQAMAKTSLQLAVQFLFHTYLRTKKKLRVDTEEWIATVEMLLS
KSSEACRWMVQYLVAAEGREIIKNCLLECNVREVRVVVASILEKTLESALCFQDTGLDCL
LDMLLSLLDKDVPENCKNCSQYFSLFSNFAQRGFGPCQLLLKHAAYRRMLIFLLGPNRQN
NQNRRWSSAQAREFLHLHNTLALVVLHTDLTSQRTETPGMFKHASSGIVSSTSLLPLHPD
VNKLLFKPEGQPYLMEVMFAMRELSGPLSFLIEMVTYCCFCNEPFSLGVLHLLKNQLETA
PPHELKNVFQMLLEILMVEDPLQSQRLKYAFESDKGLLALMHQSNNVDSSRCYQCVKFLV
TLAQKCAPAKDYFKELSGHWSWAVQWLQKKMSEHYWTPQSNVSNETSTAKTFQRTISAQD
TLAYATALLNEKEQSGSSNGSDGSPANENSDRSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7911 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaggaagagcagcacatgacgacgctcttgtgcatgggctttccggacccc
gtcgccattcggaaagccctgcgtctggccaagaacgatatcaacgaggccgtggctttc
ctgaccaacgagagccccggacttggcttcggctacgaaccgatggagagcggacccagc
ccaggctcggggcccggcggagaccgcgacacaagcgggaggaccggcagcggcagcggc
ggttttgaccctcctcccgcttaccatgatgttgtagaaggcgagagagcaaatgatgag
aatgggaactgttcagggggcaatatggagtttcccaccaccaacctgtacgagctggag
agcagggtgttcactgaccactggtcaattccatacaagagagaggagtcactcgggaag
tgtctcatcgcctccacaagccttgccagaatgggcctggctgatgcagatgagaattgt
aagagattcatggacagatgcatgcctgaggccttcaagaagttgttgatgtccagtgcg
gtgcataagtggggcacagagattcatgaggggatctacaacatgctgatgctgctagtg
gacctagtggcagagagggttaaacaggaccccatacctattggccttatgggagtactc
actatggcttttaaccctgataatgagtatcactttaagaatcgcatgaaggcgagtcag
aggaactgggccgaggtgtttggcgaagacagcatgtttgccgtctctcccagctccagt
taccagaagtttatttcgttgttgaattctgtgcgaaaacaggagcctcacggatggctg
gtggaccttgtgaatcggttcggggagatgggaggcttcactgccatacaaaccaagctg
aatcaagatgagatggagattgggtgtgtgtctgcgctggtgcagcctctcggcgtgtgt
gcagagtacctgaactccagcctggtccagccaatgctggacccggtcatccacaagatg
atcacgtatgtgcagaaccttgaagagaaagacctaaaagacaagaggttggtgagcatc
cctgaccttctgtcagccattaagctgctgtgcatgaggttccagcgggagctggttaac
gtagtggacgacctcaggttagatatccttctgcggatgctcaagacgccccacttcagc
gcaaagatgaactcgctcaaagaggtcaccaagctgatagaggagagcactgtgtctaaa
acagtgaagaacgccatagacacggaccgcctcctcgactggctggtggagaactcggtt
ctgtcgatagcactggaaggaaacattgaccaggcgcagtattgtgataggataaaggga
atcattgagcttttgggcagcaaactctcactggatgagctctcaaagatctggaaaata
caatctggccagtcatccaccgtaatcgagaacatccacaccatcatcgccgcagcagct
gtaaagtttaactgcgagcagctcaaccacctcttcgtgctcatacaaaaaagctgggag
attgagactgatcgagtccggcagaagcttttgagtctgattggaaagattggacgggag
gcacgctcagagacaactacaggaaaggtgttggaagtgctctgggaattggcccacctc
cctactcttcccacaactctagttcaacaagccctagaggaacacctgaccattctgagc
gacgcctacgccgttaaagaaactgttaagaaaagctacatcataaagtgcattgaagac
atcaagaagatacaaatacaggaggattcaaagtctaccagcgagatacaggtgtctttt
ttttctggctcctggggcaagaagaaaccagcgtgggctaaatcgtcccagcagagtaac
cctcaatcggtatgggtagttccagccctgcggcagctccatgagattactcgctccttc
atcaagcagacataccagaaacaggataagagtataatccaggatttgaagaagaatttt
gagatagtgaagctaatcacaggctctctggtggcatgtcatcgtctggctgtgacagcc
gccggccccagcggcctctgcgggtccattctggtggatggacgatactcttatcaagag
tatttggaaggccatctgaagtttttggcgttctttctccaagaagccagtctgtacttg
gtgtggaacagagcgaaagagatctgggagtgtttggtgtctggcatggacgtgtgtgag
ctagaccgggagatgtgctttgaatggtttactaaaggacagcatgatcttgaaagtgat
gttcaacaacagctgtttaaagaaaagatccttaaacttgagccatatgagattactatg
aatgggtttaatctttttaagaccttctttgagaatgtaaatctttgtgatcatcgtctc
aaacggcagggaactcaactgtgtgtggagcgtttagacctaatcgggatggactttatc
tggagaatcgccatggagtctcctgatgaggacatcgccaatgaagccattcagctcatc
atcctctacagttacttaaacctcaacccaaaaatgaagaaggactcagtgtccttgcat
aagaagtttatagctgattgttataagaggctggaggctgccagctctgccctgggtggc
ccaaccttaacccatgctgttacacgagcaaccaagatgttgacggctactgccatgcca
accgttgccacatcagtgcaatcaccctccaggtctactaagctggtaatcattgagagg
ctgctgttactagcggagagatacgtcattactatcgaggatctgtactctgttcctcgt
actatactacctcatggagcgtcattcaatggccaccctgtaacgctccacataacctat
gaatctaccaaagacaccttcagcctggaggctcacagtaatgaaacagttgggagcatc
aggtggaagattgctgagcagcttagctgtccagtggacaatgtgcagatatttgccaac
gatagcatgctgactatgaacagagaccagaagctgttgaatcagctgggtttctctgat
gagcaaagtctgacagtgaagagttcaggaactggcactccatctggcagctcagcagac
agctcggcatccgccagctccagcagcagcggagtcttcaactcggcatatgcgctggag
caggagaagtccctgcctggcgtcgtgatggcattggtgtgcaacgtgttcgagatgttg
tatcagctggctaacctagaggagcctagaataactctgcgtgtgaggaagctgttgctg
ctcatcccaaccgatccggaggtgcaggatgccctggataactttgtcccgaaagagtcc
agtgtttggagccaccagaaaactcttttcacattgggttctggatctcaggcttccaag
tctccatctctgtccagcaagcaacagcatcagcaaagtgcagcatccatcctggagtcc
ttgtttcggtcctctgccccgggcatgtccactttcagagtgctttataatcttgaggtg
ctaagctccaaattaatgccgacctcagatgacgagatggcaaagactagtgtgaagtcc
ttctgtgagaattttctcaaagctggaggtctcagtctggtggttaatgtcatgcagagg
gactctatcccctctgaagtagactatgagaccagacagggagtctactccatttgtttg
caacttgcaagattcttactagtaggacaaacaatgccaagcatcctggatgaagagctg
aataaagatggcgtggacactctgtcctctcggcccttccgtaacgcgggcaggcagagc
agccgtcagctctcgctctgtgggacaccagagaaatcatcctacaggcaaatgtccatg
tctgataggtcctccattagagttgaggagattataccagcagcacgtgtcgccattcag
acgatggaggtgggggactttacttccacagtcgcctgcttcatgcgcctcacctgggct
gcagcagctggccgtctggaccttgtgggcagcagccagccgatcagagagaccactaat
tctctgctgcctcagggagtccggagcagggttagcagcacaggaagtaactgcagttcc
agcagcgaaggagaggctacaacattgcaagccggcatctgcgtcaaacagcagtgtgtg
tccattaaagacacaataatcgcccgagaagcgctttcactcctggtcacctgcctgcag
cttcgctgtcaacagctttcttctttctataaccttccctgtgtgaatgattttatcatc
gatatactgcttggatcacccagtggagagatccgtcgggtagcgagtgatcagctgtac
actttgagtcagagtgatacatcggcatatccagagctgcaaaagcccaacctatttctg
ctgaaggtggtgttgaccgcccagctcccactctggtctcccacgagcgtcatgaggggc
atcaaccagaggttgctttcacaatgcacagaatattttgacctgcgatgccaactactg
gatgatctgactaacacagagatggagcagctgcagatcagccccgcagccatgttggag
gatgagatcagctggctggataacttcgagccaacgtggaccagtgaactggagaccagc
gaggctgataacatcctgcaggccggccatctgcgcctcatcaagaccctgctctcgctc
tgcggcaacgagaaggagcagttcggcccctccctcatccagcagcttttggatgacttt
ctgtttcgagcatcacgcattatcctgaatagcaacaacccttcaagcagcacagctcct
ctccatgacttccaccctaagtgcagtacagtcagcagtcggttggcagcgtatgaggtg
ttagtgatgttggctgacagctctatctccaacctgcagctcattactcgagagctgctc
tctatgcaccatcaggccgacccctctctctccaaagagtttgatttcctcccaccagtg
gatggacgctcaatatcagggttcgtgggcctgaagaatggcggggcgacctgctacatg
aatgctgtctttcagcaactctacatgcagccaggcttacctgaggctatcctgtcgata
gaagatgacacagagaatccagaggagagtgtcttctgtcaagtgcagtctctcttcggc
caccttatggagagcaaattgcaatactacgtgcctgagaacttctggaagatctttaag
atgtggaacaaggagctgtacgttcgagagcagcaggatgcctatgagttttttaccagc
ctggtggaccagttggatgaacatctgaagaaaattggaagagagcaactctttaaaaat
acattccagggaattttctctgaccagaaaatatgcaaagactgtccacacaggtatgag
cgtgaggaaacctttatggcactgaacttaggagtgacgtcgtgtcagagtttggagatt
tctctcgaccagtttgtcagaggagaggtgctggaaggcagcaatgcttactactgtgaa
aaatgcaaagagaagaggacaacagtgaagcgtacatgcattaagtcattgccaagtgtc
ctggttatccatctcatgcgctttggcttcgactgggagagtggacgctccattaaatat
gacgaacagataagattcccgtgggtgctgaacatggagccgtacacagtgtctggcatg
gctcggcaagactccagttcagatcatggagagaacagcagggtcggagagcctgggtct
ggaggctccccacgcaagaaagtcaccatttctgaaaactatgaacttgtaggagtggtg
gtgcacagcggtcaggcgcatgcaggacactactactcctttattaaagatcgcaggggc
agttctcggagcagatggtacaagtttaacgataacgtcgttgaggagtttgaaatgaac
gatgaaaccctggagtatgagtgtttcggtggagagtacagacctaaagtctacgatcag
tctaacccgtatccagatgtgcggcgacgctactggaatgcttatatgttgttctaccag
cggatcagcgagcagaactcccctgtgctccccaaaaagagcagagtcagtgtaatgaga
caggaagcggaggacctgtctctgtctgccccttcctcacctgatatttccccccagtca
tccccacgacctccccgagccaataatgatcggctcactctactcacccggcttgtcagg
aaaggagagaagaagggactctttgtggagaagatgcctgcaaggatttttcagatggtg
agggatgagaacctaaagttcatgaagaacagagacgtgtataatagtgattactttaac
ttcaccctgtcgttggcttctgttaactcgacgaagctgaagcatcagtcctaccaagcc
atggcgaagactagcctgcagctggctgtacagtttctgtttcacacttacctgcgaacc
aagaagaagcttcgggttgatacagaggaatggatagctacagtggagatgctgctgtca
aagagcagtgaggcatgtcggtggatggtgcagtaccttgtggccgctgaaggaagggag
atcatcaagaactgcctgttggagtgtaatgtgagggaggtgcgtgtagttgtggcctcc
atccttgaaaaaaccctggaaagtgccctgtgtttccaagacactgggctggactgcctt
ttagacatgctgctatctttgcttgataaggacgtcccagagaactgcaagaactgctca
cagtacttcagcctgtttagtaactttgcccagaggggattcgggccttgtcaactactg
ttaaagcatgctgcttatcgaaggatgctcattttcctgttgggtcctaacagacagaac
aatcagaaccgtagatggagttcagctcaggcacgagagtttctgcacttgcataacact
cttgccctggtggtgctgcacacagatctgacatctcagagaacagagactcctggaatg
tttaagcatgcttcctctggcatagtgtcctcaacctcactcctgccactgcacccagat
gtcaacaaactgctgttcaaacctgaggggcagccttaccttatggaggtaatgtttgcc
atgcgtgagctgtctggaccgctgtccttccttatagagatggtgacatactgctgcttt
tgtaacgagcccttctctctcggagtgctgcatctgctgaagaatcagctggagacagct
cctcctcatgagctcaagaatgtcttccaaatgcttctggagattctgatggtagaagac
cctctacagtcccagagactcaaatatgcattcgaatctgacaaagggcttctggctttg
atgcatcagagcaacaatgtggacagcagccgctgctaccagtgtgtcaagttcctcgtg
actttagctcagaagtgtgctcctgctaaagattacttcaaggagctgtcagggcactgg
agctgggcggtgcagtggctgcagaaaaagatgtcagagcattactggacacctcagagc
aacgtgtccaatgagacgtccacggctaagaccttccagcggaccatctcagcacaggat
acactggcctatgccacagctcttctaaatgagaaggaacaatctggcagcagtaacggt
tctgacggcagtccagctaacgagaactccgaccgcagcctcagacagggctctgagtct
ccaatgatgctgggtgattcgaagagcgatttagaagacgtcgacccctaa
DBGET
integrated database retrieval system
