Clarias gariepinus (North African catfish): 128514954
Help
Entry
128514954 CDS
T10780
Symbol
nhsl1b
Name
(RefSeq) NHS-like protein 1 isoform X1
KO
K24144
Nance-Horan syndrome protein and NHS-like proteins
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128514954 (nhsl1b)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
128514954 (nhsl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHS
Motif
Other DBs
NCBI-GeneID:
128514954
NCBI-ProteinID:
XP_053344865
LinkDB
All DBs
Position
27:11508913..11616413
Genome browser
AA seq
1632 aa
AA seq
DB search
MPFHERTVEPRRLCRLKVAGERDAGIAPLLFSSLDEVSSRALALLLRQLSDLSRHASDVF
RGVELQAALVLRRSARIQQRLDGLQGVVRELNPKQVQIPVSNLDEESKWTVHYAAPWHQQ
ENVFLPSSRPACVEELHRQAKVNLKTALRDCDKLRKDGFRSSQYYSQGPTFSGSGQSRIS
QMEDEDDIDDIDDKSNASSADGDKSSSAMRANGAVKAVRDEVDGQESRFKPLPTPEEKMR
QQAQAIMTDIVPINVTGMTFDRQASVRRSLINTDTLTRRPKKVKRRTTISGLPNNVQQEL
AKGRGGELRPQSMFIPGAFSTLERSGSLSSTLRRSEMRDSMCQTEEVKIVPPSVRRIRAQ
RGQGIAAQMAGLSTSATNISTGANEHSPGSPVHVMAPRFNGDPQRFHSLPRGARVSLNPD
LLNSGNSIRPEDSAVPASRQIGKLQVDDTAVHMRNAPRTSTSARPKSQEVWGSHGDWGTA
SVVSPHAAYSTSLIPNATLSCSAEVISLHSSPEQQLHARPLRISSSINGESSTSVATSAE
TGETDMQEARQSDSSLNSHSTLAAGTASSDEQWIYDTPENVLPRRPLTSSCSTPINHLYN
SLERSSKGTDSSSLYSMDNDGYYTSMHLDSGLRPKGPSIAGRTARHSMYEYIGQPGDRSS
IYSNQSLSRSISLRKSKKPPLPPARTDSLQRKPKNKNAVNASNGSILNESLIATLQQSLQ
NGLKGKGSLTSSSQSPSSDYEDPWMLRPRSQSSLSASSSGVSAAGVANVYSICHVTPSQS
DTSSLRSDYAESWGYYMDYPRLHSDQAQSPAHTNLMSNGGQPDIVTNGPHIHNDIQKALP
PAQGNMSAKPQVNTSSPDRVHRLTSPSSGYSSQSNTPTAGTPVPTFMRSMSPSGCKPKPR
VPERKSSLLSSVSISSSSTSLSSNTSDSNRNNIPPPPPPLPHLSGSLSPLTHEPFPPPLP
PCSPVCSSSQTFPPPPAPPLPNTPHHEVISLSPLSIDSSSEFPPPPPELLNDDSLLHNGS
FSPILHPPLPPPPPSTVNAHTPPQPPCLPALTPVIPSSASLKGIKKRLKPVNSDRRSMSI
HSEEIGKPGMPIITPFALQSVQLRSVKQPEKREDSNKSQQVETERISTKHGTTENFKQLE
DPTVVSKQPSCSTPEINGTMKSPSTENIPAKDKNQEEIPPKTNPEEKIPYELTDCPLSDF
LSHPEAELDGIQREERKPQNTTPKKAPPLLSKKPKLSKVSAIDAELIVEDKQTLHNEEKE
SFQEILKVQESMPVCVPNPEVVEEVEKNDDKIFACESITCPADSRVEEPSQTPVNLEASV
SADDEMDYSEGEEEEHGDDDEYTISSTATSVCSKDDGEVFDSNSSNSPQTPSINGDDSQD
MVTPTRPRTTEDLFAAIHSSDREWLGMNAPQPQRSKRKVLGRRESDDERVRGQSSPPATP
TGPVPSLTSTLPRQSGSIQRSLRKSATSSDTFKALLLKKGSRAEGSFRMSATEMLRTTDP
RSQRTRSLDSSLDPSSPTGGLDSPCSSPGRSKRLPEDWPRNETVLQRYSLSSPLSPSSML
GPKYGRSRTPPSAASSRYNSRSRIPSSPMTVICEREGELTESGEGLDEAVSPLGSSITVT
QDLTGTLCEGET
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgcctttccatgagaggacggtggagccgcggcggctgtgccggctgaaggtggcgggt
gagcgggacgcgggcatcgcgccgctgctcttctcctcactggacgaggtgagctcgcgg
gcgctcgcgctgctcctgcgccagctgagcgacttgtcccggcacgcgagcgacgttttc
cgcggcgtcgagctgcaggctgcgctcgtgctcaggcggagcgcgcgcatccagcagcgc
ctggacggcttacagggcgtcgtgcgcgagctcaaccccaagcaggtccagatccccgtg
tctaacctggacgaggagagtaagtggacagttcactacgcggcaccgtggcaccagcaa
gagaatgtcttcctgccttcatccagaccagcctgtgtggaagagctgcaccggcaagct
aaagtcaacctcaaaacagccctcagagattgtgataagctgagaaaggatggctttcgc
agttcccaatactactcccagggtcctaccttctcaggttcaggccagtcccgcatcagc
cagatggaggatgaggatgatattgatgatattgatgataagtcgaatgcctcctctgca
gacggggacaaaagctccagcgcaatgagagcaaacggtgcagtaaaggccgtcagggat
gaggtggacgggcaggagtcgcgcttcaaacccttacccactcccgaggaaaaaatgaga
caacaagctcaggccattatgaccgacatcgttcccatcaatgtcacagggatgacgttt
gaccgtcaggccagcgtccgtcgctccctaataaacactgacactctgacccgtcggccc
aagaaggtcaaacggagaacgactatttcaggtttacccaacaacgttcagcaggaacta
gctaagggacgaggaggggagctccgaccacagtccatgtttattcctggagcgttttca
acattggaacgttctgggagtttgagttctacgctaaggcgctctgagatgagggattcc
atgtgccagaccgaggaggtaaaaattgttccaccgtctgtaaggaggatccgagctcag
agaggccaaggaattgctgcccaaatggctggcttgtcaacatccgcgaccaatatatct
acaggtgcaaatgaacattctccgggatctcctgtgcatgtcatggctcctcgatttaat
ggtgaccctcagcgcttccacagtttgccacgtggtgcccgggtttctttgaaccctgat
cttttaaacagcggtaactcgattaggccagaggatagtgccgtaccagcatcgcggcaa
attggaaagctccaagttgatgacactgcagttcacatgaggaacgcccccaggactagc
acttcagcccgcccaaaatcccaggaggtatggggatcacatggggactgggggactgca
tctgttgtatctcctcatgcagcatactcaacatcgctcatccccaatgcaacattgtca
tgttcagctgaggtgatttcccttcactctagcccagagcagcaactgcatgcaaggcct
ctcaggatatcatcaagtatcaatggagaaagctccaccagtgtggcaaccagtgctgag
acaggagagacagacatgcaggaagcccgtcagtcagacagcagcttaaatagccacagt
acccttgctgcaggaacagcatcatcagatgagcaatggatttatgacacccctgagaat
gtcttgcccagaagacccctcacctccagctgctccactcctatcaatcatctctacaat
agcctggagcggtcctctaaaggaacagactccagttcactctactccatggacaatgat
ggttactacacttccatgcatttggactcgggtctgagaccaaaagggcctagcattgca
ggcaggacagcacggcatagcatgtatgagtacataggccagccaggtgatcgtagcagc
atttacagcaatcagtcgctatctcgatccatttccctccgcaagtctaagaagccaccc
ctcccaccagcacgtacagactccctgcagcgtaagcctaagaataaaaatgctgttaat
gctagcaatggttcgattcttaatgagtcactgattgctacacttcaacagtcgctgcaa
aatgggttgaaaggaaaggggtctttgacctcatcatctcaaagccctagtagtgactat
gaagacccctggatgttgcgccctaggagccagagcagcttaagtgcaagcagtagcggt
gtgtcagccgcaggggtggctaatgtttattccatctgtcatgtcacaccgtcacagagt
gacaccagcagcctgcggtctgattacgcagagtcttggggctattacatggattaccct
cgtctgcatagtgatcaggcacaatcaccagcacatacaaacttgatgtctaatggagga
caacccgatatagtgacaaatggaccacatatccacaacgatattcaaaaagcccttcct
cctgctcagggcaatatgtcagcaaagcctcaggtaaacacatcctcgccagatagggta
catcgattgacctccccttcaagtggatattcaagtcagtccaacactccaacagctggt
actcctgttcccacgtttatgaggtctatgtcaccttctggctgtaagcccaagccacgt
gtgcctgaaaggaagtcctctttgctctcgtcagtgtccatctcctcttcttcaacatct
ttatcttctaacacttcagattctaataggaacaacatcccccctccacccccaccactg
cctcatttatcagggtctctttcaccgctaacccatgaacctttccctccacctcttcct
ccctgcagtcctgtctgctcttcaagtcaaacctttccacctccacctgctcctccttta
cccaacaccccacatcacgaagtaatatccttaagcccgctctccatagattcctcttca
gagtttcccccccctcctccagagttgttgaatgacgacagcttgctccataatggatcc
tttagccccattcttcatccgcccctacctccaccacctccctctactgtaaatgctcat
actcccccacaacccccatgcttgcctgcattgactccagttataccttcttctgcaagc
ctaaagggaattaaaaaaagacttaaaccagtaaactcagacagaaggtcaatgtccatt
cattctgaagagattggcaagcctgggatgccaataataaccccgtttgctctccaaagt
gtgcagcttcggtccgtcaagcaaccagagaaaagggaagacagcaataaatctcaacag
gtggaaactgagcggatttctactaagcatggcacgacagagaattttaaacagttagag
gacccgactgttgtgtcaaagcaaccttcttgctctactcctgaaataaatggaacaatg
aaatctccatcaacagagaatatacccgccaaagacaagaaccaagaagagataccacct
aagacaaatccagaagaaaaaattccttatgaattgactgattgccctttaagtgacttt
ctaagccaccctgaagcagagttggatggtatacagagggaggagaggaaaccacaaaac
accacacccaagaaagcacctcctctgttgtccaagaagcccaaactctccaaagtctcc
gctatcgacgcagagcttattgtagaggacaagcagacactgcacaatgaggagaaggaa
tcttttcaagagattttaaaagttcaagaatccatgcctgtttgcgtgcctaacccagag
gttgtggaggaggtagaaaaaaatgatgacaaaattttcgcgtgtgaaagcatcacatgc
ccggctgatagtcgggttgaggaaccttcgcagacacccgtcaatctggaagcctctgtg
tctgctgatgatgaaatggactattcagaaggagaagaggaagaacatggagatgatgac
gaatatacaataagcagcactgcaacatcagtctgctccaaagatgacggtgaagtattc
gactccaactcatcaaactcgccccagactcccagcattaacggtgacgactctcaagac
atggtaactcccacacggcctcgcaccacagaggacctctttgcagcaattcacagctca
gaccgtgaatggctgggcatgaatgccccccagccccagaggtccaagcgaaaggtcctg
ggtcgaagggagtcagacgatgagcgtgtgcgaggtcaatcatctcctccggccacaccg
acaggaccagttccttccctcacctcgactctgcctcgacagtctggttctatccagcgc
agcctgcgcaaatcagccaccagcagtgacaccttcaaggcactgctgttaaagaagggc
agccgcgcagaaggcagcttccgcatgtccgctactgaaatgctacgcacaaccgacccg
cggtcccaaaggactcgatcgctagactcctctctggacccgagttcacctacaggaggc
ctggacagcccctgctcttcccctggtcgcagcaagaggctgccggaggactggccccgg
aatgagaccgtactgcagcgttactctctgtcttcgcccttgtccccttcctccatgctg
ggaccaaagtacggccgatctcgcacaccgccctctgctgccagcagcaggtacaattcc
cggagtcgtattcctagcagcccaatgaccgttatctgtgagagagaaggagagttaacc
gagagtggagaaggactggatgaagctgtttctccattaggttcctccatcacagttact
caagacttaactggcactttatgtgagggggagacttaa
DBGET
integrated database retrieval system
