Clarias gariepinus (North African catfish): 128514962
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Entry
128514962 CDS
T10780
Symbol
papola
Name
(RefSeq) poly(A) polymerase alpha isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128514962 (papola)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128514962 (papola)
Enzymes [BR:
cgar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
128514962 (papola)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
128514962 (papola)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF6431
Motif
Other DBs
NCBI-GeneID:
128514962
NCBI-ProteinID:
XP_053344883
LinkDB
All DBs
Position
27:complement(17116394..17131580)
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AA seq
769 aa
AA seq
DB search
MPFPIMNQGQPAQDTPKHYGITSPISLALPKDSDLAQTQKLVQALKPFGVFEEELELQRR
ILVLGKLNTLVKEWIQEISRSKNIPPALVETIGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVDRSDFFTSFYEKLKEQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEN
LDLRDDSLLRNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVYKFFLVFSKWEWPNPVLLKQPVECNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSVSTRNVMVEEFKQGLAIMDEVLQNKADWSKL
FEAPNFFQKYKHYIVLLASAPSEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF
PGPKEGNKTPEFSTMWVIGIEFKKMEGSELLNVDLTFDIQSFTDTVYRQAISSKMFEADM
KITAMHVKRKQLHQLLPDLVIPKRRKHSTEGLRAVSEGGVDLSLDSDNSMSMPSPTGTSS
TARIPSSASPHRPTGTTASSDSQGKIDPSGCTLPAAPCPSELKTSIASGPPSAQEKLRLQ
EPSTVNEGSVDFTMDRDNSMSIPSPTDASRTAVSASPHCSTGTTASSDSQEKMDMSVDTH
PAAEMKSLSPTCAEKRPGSPLHNEQAKKLRVDEDSTSDSVDQAAEFSQANDLTVLEGEVK
METEAAKSDADGKTSPSQKISSTDLSDVALPPANPIQVVKNSIKLRLSR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgccttttccaattatgaatcaggggcagccagcccaggacaccccaaagcattatggg
atcacgtcgcccatcagcctggccttgccaaaagactcggacctggcgcagacgcagaaa
ctggtccaggcgctgaagccattcggggtgttcgaggaggagctcgagctgcaacggaga
atcctggttttgggaaagttaaacacactagtcaaagagtggatccaggagatcagcaga
tccaagaatataccaccagcactggtagaaactatcggcggaaaaatctttacgttcgga
tcctataggttaggagtccacacgaaaggtgctgatattgacgctctctgtgtggccccg
cgacacgtggacaggtccgacttcttcacctctttttacgagaagttaaaagagcaagag
gaagtcaaagacctaagggcggttgaagaggcattcgtccctgtgattaaactgtgcttt
gatggcattgagattgatatcctgtttgcccggttagcgctgcagaccattccggagaac
ctggacctccgggatgatagtttactgaggaacctggatatccgctgtataaggagtcta
aacggttgcagggtgacggatgagattctccacctggtgcccaacatcgagaatttcaga
ctcactcttagggccattaaactgtgggctaagcgtcacaacatatattccaatatcttg
ggatttttgggtggtgtgtcttgggcgatgcttgtggcaaggacgtgtcagctttacccc
aatgctgttgcgtcaacgctcgtgtacaagttcttcctagtgttttctaagtgggaatgg
cctaatccagtccttttaaagcagcctgtggagtgtaacctgaacctgccggtttgggac
ccgagggtaaccccaagtgaccggtaccacctcatgcccatcatcacaccggcttatcct
cagcaaaactccacctacaacgtgtctgtgtccacacgcaacgtcatggtggaagagttt
aaacagggtctggccatcatggatgaagtattgcagaacaaagccgactggtccaaacta
ttcgaagctccaaacttctttcagaaatacaagcattatattgtgttgctagcaagtgcg
cccagtgagaagcagcacctcgagtgggtcggcctcgtcgagtccaagatccggatcctg
gtgggaagcctggagaaaaacgagttcatcactctcgcacatgtaaatccgcagtcgttc
ccaggacccaaggaaggcaataaaacgccagagttcagcacgatgtgggtcatcggtatc
gagttcaagaaaatggaggggtctgaactcctgaacgtcgacttgacgttcgacatacag
tcgttcacggacacggtataccgtcaggccatcagcagcaagatgtttgaggccgacatg
aaaataacggcgatgcacgtgaagaggaagcagcttcaccagctcctgccggacctcgtc
atcccaaaaaggagaaagcattcgaccgaaggcctgcgcgctgtaagtgagggcggcgta
gacttgtcgctcgacagtgataacagcatgtccatgccctcacccactggcacctccagt
actgccaggataccttcctctgccagtccacaccgccctacagggaccacagccagctcc
gattctcaggggaagatcgacccgtcaggatgcacgcttcctgctgctccgtgtccgtct
gagctgaagacctccatcgcgagcggtcctccttctgcacaggagaagctcagattgcag
gagccttcgactgtgaatgagggcagtgtggactttaccatggacagggataacagcatg
tccatcccctcacccactgacgcctccaggacagccgtctctgccagccctcactgctcc
acaggaaccactgccagctccgattctcaagaaaagatggacatgtcagtggacacacat
cctgccgctgagatgaaatccctgagtcctacatgtgcagagaagagaccgggctcacca
cttcataatgagcaagctaagaagctcagagtagacgaggattctacctcagactcggtg
gaccaggctgctgaattttctcaggctaacgatctcaccgttttagaaggagaggtgaaa
atggagacagaggcagcgaagtctgatgctgatgggaagacatcaccatcgcagaagatt
tctagcaccgatctgtccgacgtggctcttcctcctgctaaccccatccaagtggtgaaa
aactccataaagctcagactgagcaggtag
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