Clarias gariepinus (North African catfish): 128515053
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Entry
128515053 CDS
T10780
Symbol
psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
128515053 (psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cgar03051
]
128515053 (psmc6)
Proteasome [BR:
cgar03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
128515053 (psmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_16
AAA_2
AAA_22
AAA_5
PRS7_OB
RuvB_N
nSTAND3
AAA_14
Prot_ATP_ID_OB_N
DUF815
AAA_lid_PRS2_C
AAA_7
AAA_11
TIP49
AAA_33
RNA_helicase
Csa3_N
AAA_3
NPHP3_N
AAA_18
DUF3829_2nd
Mg_chelatase
bpMoxR
DUF5906
TPR_MLP1_2
AAA_28
AAA_24
TsaE
ATPase
NACHT
AAA_25
Occludin_ELL
AAA_17
Parvo_NS1
ATPase_2
IstB_IS21
COG4_N
DUF4140
GAS
Med4
Motif
Other DBs
NCBI-GeneID:
128515053
NCBI-ProteinID:
XP_053345039
LinkDB
All DBs
Position
27:complement(23969848..23978561)
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AA seq
389 aa
AA seq
DB search
MADSREKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKTKLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADRD
FVTQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagcagagagaaagcgttacaggactacaggaagaaattactggaacataaa
gagatcgacgggcggctgaaggagttgagagagcagttgaaggagctgaccaagcagtac
gagaagtctgagaacgacctgaaggcactgcagagtgtgggccagattgtaggagaggtg
ctgaagcagctgacagaggaaaaatttattgttaaagccactaatgggccgcgctatgtg
gtggggtgcaggagacagctggataagacaaagctgaagcctggaacccgtgtggcgctg
gatatgaccacactgaccatcatgaggtacctgccacgtgaggtggacccgttggtgtat
aacatgtctcatgaggacccggggagtgtgtcgtactctgagattggaggattatcagag
cagatcagagagctcagagaggtaattgagctgcctctaaccaaccctgaactgttccag
cgtgtggggatcatcccccctaaagggtgtctgctgtacggacctccaggtacggggaaa
accctgctagcgagagctgtagccagtcagctggactgtaacttcctcaaggtggtgtcg
agctccattgttgataagtatatcggtgaaagcgctcgtctgatcagagagatgtttaat
tacgcacgagatcatcagccctgtatcatcttcatggacgagatcgacgccatcggtgga
cggcgtttctctgagggaacctcagcagaccgtgagatccagagaaccttgatggagctg
ctgaatcagatggacgggttcgacactctgcaccgtgtgaagatgatcatggctacaaat
cgtcctgatacactggacccggctctactccggcccgggagactcgacaggaagatccat
attgagttgccgaatgagcaggctcgtctggacatcctgaagatccactcggggccgatc
actaaacacggggacattgattacgaggcgatcgtgaaactgtctgatggatttaatgga
gctgacctgcgtaacgtctgcacagaagctgggatgtttgctatccgtgctgatcgagac
ttcgtcactcaggaggacttcatgaaggcggtgaggaaagtcgcagactccaagaaactc
gagtccaaactggattataaacctgtctag
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