Clarias gariepinus (North African catfish): 128515067
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Entry
128515067 CDS
T10780
Symbol
six1b
Name
(RefSeq) homeobox protein six1b
KO
K15614
homeobox protein SIX1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128515067 (six1b)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
128515067 (six1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
128515067
NCBI-ProteinID:
XP_053345058
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Position
27:7510828..7513370
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AA seq
279 aa
AA seq
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MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENSNAGANKQNQLSPLDGGKSLMSSSEDDEFSPPQSPEQNPALLLQANMN
HPASSYSMSGLAMQSHPHQHQLHDSILGPLTSSLVDLGS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttgccctcgttcggcttcacgcaggagcaggtcgcgtgtgtgtgcgaggtg
ctgcagcagggcgggaacctcgagcgactgggccgattcctgtggtccctgccggcctgc
gaccatctccacaagaatgagagtgtcctcaaggccaaggctgtagtggcgttccaccgc
ggcaactttagggagctgtacaaaatcctggagagccaccagttttcgccacacaaccac
cccaaattgcagcaactgtggctgaaagcccactacatcgaggccgaaaagctgaggggg
cggccgctgggcgctgtgggaaaataccgagtacggaggaagtttcctttaccacgcacc
atatgggacggagaggagaccagctactgtttcaaagagaagagccgcggcgtgttgagg
gagtggtacacgcacaacccatatccctctccacgagaaaaaagagagctggctgaagcc
acagggctcacaaccacacaagtgagcaattggtttaaaaacaggagacagagagatcga
gccgctgaggccaaagaaagagagaacagcgagaacagcaatgcaggcgcgaacaaacag
aaccagctgtctccgttggatggcggaaagtcgcttatgtccagttcagaagacgacgag
ttctctcctccacagagtcccgagcagaacccggctctcctgctgcaggctaacatgaac
caccccgcctcctcctacagcatgagcggcctggcaatgcagagccacccgcaccagcac
cagctccacgactccatactgggacctctgacctccagcctggtggatctgggctcttaa
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