Clarias gariepinus (North African catfish): 128515232
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Entry
128515232 CDS
T10780
Symbol
etf1a
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128515232 (etf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128515232 (etf1a)
03012 Translation factors [BR:
cgar03012
]
128515232 (etf1a)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
128515232 (etf1a)
Translation factors [BR:
cgar03012
]
Eukaryotic type
Release factors
128515232 (etf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
128515232
NCBI-ProteinID:
XP_053345290
LinkDB
All DBs
Position
2:16247885..16261821
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AA seq
443 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGLVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRVHGAEVNGAENDEKTIYLTPEQEKDK
SHFTDKETGQEHELIECMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGMEYQGEDDEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacccgagcgcagccgacagaaacgtggaaatctggaaaattaagaagctc
ataaagagtttggaggctgctagaggtaatgggaccagtatgatttcgttgatcatccct
cctaaagatcagatttccagagtggccaagatgctggctgacgagtttggtacagcgtcc
aacatcaagagcagagtcaacagactttctgtgctgggagccatcacctctgtacagcag
agacttaaactctacaacaaagtgcccccaaatggtctggtagtctactgtggcaccatt
gtgactgaagaaggcaaagagaagaaagtcaacattgactttgagcctttcaaacctatc
aatacctcgctttatctctgtgacaataaatttcacactgaggcgctcacggcgttgttg
tccgatgacagcaagtttggcttcatcgtcatcgatggtagcggcgcgctattcgggacc
ttacagggcaacaccagagaagtgctgcacaaattcacagtggacctacccaaaaaacac
ggtcgtggaggacagtctgcgctccgttttgcacgattgagaatggagaagagacataac
tacgtgcgtaaagtggcagagacagcggtccagctcttcgtgtccaacgacaaagtcaac
gtagctggtttggtgctggctggctctgcagacttcaagactgaactcagccagtccgac
atgtttgatccgaggttacaggcaaaggtgctgaagcttgtggacatctcgtacggagga
gagaatggtttcaatcaggccatcgagctgtcggccgaggtcctctccaacgtcaaattc
atccaggagaagaagctaataggtcgctattttgatgagatcagccaggacacggggaag
tactgtttcggggtcgaggatacgcttaaggccctggagatgggagcggtggagatcctt
attgtttacgagaacctggacaccatgagatacatcctacgagtacatggggctgaggtc
aacggagcagaaaacgatgagaagaccatttatttaacacctgagcaagagaaggacaaa
tcccacttcacagacaaggagacgggacaggagcacgagctaattgagtgcatgccgctg
ctggagtggtttgctaataactataagaagtttggagccacgctggagatcgtcacagac
aaaagtcaagagggttcgcagtttgtaaagggatttggaggaattggaggtattctgcga
tacagagtggatttccaggggatggaataccagggggaagacgacgagtttttcgatttg
gatgactactag
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