Clarias gariepinus (North African catfish): 128515274
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Entry
128515274 CDS
T10780
Symbol
matn3a
Name
(RefSeq) matrilin-3a isoform X1
KO
K19467
matrilin
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
128515274 (matn3a)
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
128515274 (matn3a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
VWA
EGF_CA
Matrilin_ccoil
VWA_2
EGF
hEGF
EGF_3
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
128515274
NCBI-ProteinID:
XP_053345359
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All DBs
Position
27:18069084..18084312
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AA seq
960 aa
AA seq
DB search
MKSFIRVLLSCLSFLLVDFSDCYNVIYPSQILAQSYAQRRNDANPANARPPLRTLSPAVD
SSIYRLNGEQYLHKDQPKVLSQLVNYPGRKSLSLAKAKDWQKDLSSTQIILSPLHENPQL
RREWAAVLCRKVAAPDGSLTGHVEVEEESLAGQETLQVVPALSTTVQSFVIPELPPASLD
RSHAKEGQSREVPEQPLVVPGLSSPGPEISFTDSSQEGPEQSLAGQGQSRKLPEQSLVLS
GLSVTNPEQTLLVPERLPEHPEQSAEHLQIPTGNPVTPFQPTSPPAHQWTWITSALRPNL
SLTKSTLAPQLFREATSSQSVPASTLAPQLYPKTTSALSSGRTATDSHCRSRPLDLVFII
DSSRSVRPGEFEKVKVFLAAMVDTLDIGADATRVAVVNYASTVKIEFLLKDHLKKESMKQ
AISVIEPLAAGTMTGLAIKKAMEEAFTEQSGARPKSQKIAKVAIIVTDGRPQDQVEEVSA
AARASGIEIYAVGVDRADKQSLRLMASHPLEDHVFYVETYGVIEKLTSKFRETLCGVPPC
KMGHSCQHICVGNGTSYYCKCHPGYVLNEDKRTCSVNRDSVRDSHTDGAGNGRNDDNDDN
DGESSASIDACALGHDCQHTCVSSSSSYYCTCLPGFVLMQDKKSCFKANAGGGDDNDDDD
DDDDGSASLGQCGIGHDCEHICVNSDSSYHCKCRRGFVLNEDKKTCSRLDQCEMGHDCEH
SCISSDDSYHCECQKGFVLNEDKKTCSRLDQCGMGHDCEHICVSSDSSYHCECWRDFVLN
DDKKTCSRLDQCGVGHDCEHICVTSDGSYHCKCPRGFVLNEDKKTCSRQDQCGMGHGCEH
ICINNDNSHHCECRAGFVLNEDKKTCSRLDECGMGHDCEHICVSSNESYQCECWRGFTLN
GDKKTCSHEEMKVEIVQDPCHCEARLAFQRQTQNSIQALNGKLADITKKVQQVERMLSNK
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccttcatcagagttttactctcttgcctttcatttctgctggtggatttctcc
gactgctataatgttatttatccatcacagattttagcccagagttacgcacagagaaga
aatgatgctaatccagccaacgccagaccaccactaaggacgcttagtccagcagtagac
agcagtatatataggttaaacggagagcagtatcttcacaaagaccagccgaaggttttg
tctcaactggtaaactatcctggacgcaagagcctttcactagccaaagctaaagactgg
caaaaagacttatcatcaacacagataatactgtctccgttacacgagaacccccagctg
aggcgtgaatgggcagcggtactttgccgcaaagtggcagctcctgacggatctcttaca
ggacatgttgaggtcgaggaagaatcgcttgcaggtcaagaaacacttcaagtagttcca
gctctttcgactacagttcaatcgtttgtaattccagaattaccacctgccagtttggac
aggtcacatgccaaggagggacaatcacgagaagtcccagaacaaccacttgtagttcca
ggactttcaagtccaggtccagaaatttcatttacagattcttcacaggaaggtccagag
cagtcacttgcgggtcaggggcaatctcgtaaacttccagaacagtctcttgtactttca
ggtctttcggttacaaacccagagcagacgctcttagttccagaacggttacctgaacat
ccagaacaatccgcagaacatttacaaattccaacaggtaatccagtgacacctttccaa
ccaacatctcctcctgcacaccagtggacctggataacctcagcattgcggccaaatctc
tcacttacaaagtccactctggcgccacaactattccgtgaagccacctcatcacagtcc
gtgccagcgtccactctggcaccacagctgtatcctaaaacaacctcagcactcagttca
gggaggacagctacagattctcactgtaggagccgcccgctggacctcgtctttatcata
gacagctctcgcagtgtgcgtccaggtgagtttgagaaggttaaggtcttccttgcggcc
atggttgacactctggacatcggagctgatgccacccgggtcgccgtggtgaactacgcc
agcaccgtcaaaatcgagttcctcctcaaagaccatctgaaaaaagaaagcatgaagcaa
gcgatcagtgttatcgaacctctggctgctgggaccatgaccggtctggccatcaagaaa
gccatggaagaggccttcaccgagcagtcgggagcacggccgaaatcacagaagatcgcc
aaggtggccatcatcgtcacggacgggcgtcctcaggatcaggtggaagaggtgtccgct
gcagcccgagcctcagggatcgagatctacgcggtgggcgtggaccgggccgacaagcag
tcgctcaggctcatggccagccatccactagaagaccacgtgttctatgtagagacctac
ggcgtcatcgagaagctcacatccaagttcagggagactctgtgtggtgtaccaccatgc
aaaatgggacacagctgtcaacacatctgtgttggaaacggcacatcctattactgcaag
tgtcatcctggctatgtcttaaacgaagacaagaggacatgctctgttaacagggacagt
gtccgtgatagtcacaccgatggtgcaggcaatggacgtaatgatgataatgatgacaat
gatggtgaaagtagtgccagtatcgatgcttgtgcactgggtcatgactgtcagcacact
tgtgtgagcagtagctcttcctattactgcacctgtctcccaggctttgtcttgatgcag
gacaaaaaatcttgtttcaaggccaatgctggtggtggtgatgataatgatgatgatgat
gatgatgatgacggtagtgccagtctgggccagtgtgggatcggacatgactgtgagcac
atttgtgtcaacagtgatagctcgtatcactgtaaatgccggagaggttttgtcttaaat
gaagacaagaaaacttgctcacgtttggaccagtgtgagatgggacatgactgtgagcac
agttgtatcagtagtgatgactcgtatcactgtgaatgtcagaagggatttgtcttgaat
gaagacaagaaaacatgttcacgtctggaccagtgtgggatgggacatgactgtgagcac
atttgtgttagcagtgatagctcctatcactgtgaatgctggagggactttgtcttgaat
gacgacaagaaaacttgttcacgtctggaccagtgtggggtaggacatgactgtgagcac
atttgtgtcaccagtgatggctcgtatcactgcaaatgcccgagggggtttgtcttgaat
gaagacaagaaaacttgttcacgtcaggaccagtgtgggatggggcatggctgtgagcac
atttgtattaacaatgataactcgcatcactgtgaatgcagggcggggtttgtcttgaat
gaagacaagaaaacctgttcacgtctggacgagtgtgggatgggacatgactgtgagcac
atttgtgtcagcagtaatgaatcctatcagtgtgaatgctggagaggttttaccttaaac
ggagacaagaaaacctgctcacatgaagaaatgaaggtggagattgttcaagatccgtgt
cactgcgaggccagactggctttccaaaggcagacacaaaactccatccaggcgcttaat
ggcaaactggcagacatcaccaagaaagtacagcaagtggaaaggatgctgtctaacaag
tga
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