Clarias gariepinus (North African catfish): 128515294
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Entry
128515294 CDS
T10780
Symbol
elp3
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgar03016
]
128515294 (elp3)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
128515294 (elp3)
Transfer RNA biogenesis [BR:
cgar03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
128515294 (elp3)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
Motif
Other DBs
NCBI-GeneID:
128515294
NCBI-ProteinID:
XP_053345388
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All DBs
Position
27:complement(1455833..1485091)
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AA seq
548 aa
AA seq
DB search
MGKPRKKSDLSRAELMMMTIADVIKQLVEAHEQGKDINLNKVKTKTSAKYGLSAQPRLVD
IIAAVPPQYRRALVPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGPDSD
FEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALPE
DYRDYFIRNLHDALSGHTSNNVAEAVRYSERSNTKCVGITIETRPDYCLKRHLSDMLAYG
CTRLEIGVQSVYEDVARDTNRGHTVRAVCESFHLAKDAGFKVVSHMMPDLPNVGIERDVE
QFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTGRYKSYSPSTLVDLVARILALVPPW
TRVYRVQRDIPMPLVTSGVEHGNLRELALARMKDMGTECRDVRTREVGIQEIHHKVRPYQ
VELIRRDYVANGGWETFLSYEDPEQDILIGLLRLRRCSAQSFRPELKNAVSIVRELHVYG
SVVPISSRDPSKFQHQGFGMMLMEEAERIARDEHGSAKLAVISGVGTRNYYRKLGYELEG
PYMVKCLD
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaccgagaaagaaaagtgatctgagccgggctgaactgatgatgatgacgatt
gcagacgtcatcaaacagttagtggaggctcatgagcaggggaaagacatcaaccttaac
aaggtgaagacgaagacgtcagcaaagtacggcctttcagcacaaccacgtctagtggac
atcattgctgctgtgccgccccagtaccgacgagctctcgtgccaaaactgaaggccaaa
cccatccgcacagccagtgggattgctgtagttgctgtgatgtgcaagccccatcgctgt
cctcacatcagttttacaggaaacatttgtgtgtactgtccaggtggtccagactctgac
tttgaatattcgacacagtcgtacacaggctatgagccaacgtcaatgagggccatccga
gcacgatacgatccctatttacagacgagacacagggtggagcagctgaagcagctgggc
catagcgtggataaggtggaatttatcgtaatgggcggcacattcatggctctacctgag
gactacagagattacttcatccgcaacctacacgatgcactttcaggacacacttccaac
aacgtagctgaggctgtcaggtactcggagcgcagtaacaccaagtgtgtggggatcacc
atcgagacccggccagactactgtctgaagaggcatctgagtgacatgctggcgtacggc
tgcaccaggctggagatcggcgtgcagagcgtttatgaagacgtggctcgtgacaccaac
aggggccatactgtgcgagctgtgtgcgagtcttttcacctggctaaagatgcaggattt
aaggtggtgtcacacatgatgcctgacctgcccaatgtaggcatcgagcgagacgtggag
cagtttatagagttctttgagaatcctgcatttcgcccagatggtttgaagctctaccct
acgctagtgatccgtggaacaggtctgtacgagctgtggaagacgggacgctacaagagc
tactctccaagcactctggtggacctggtggcccgaatcctggcactggtgccaccctgg
acacgagtgtaccgcgtgcagagggacatccccatgccactggttacctctggtgtggaa
cacggaaacctgcgagagctggcactggcccgaatgaaggacatgggaactgagtgtaga
gatgtgagaaccagagaggtaggaatccaggagatccatcataaagtgcgaccgtaccag
gtggagctgatccgacgagactatgtggccaatggaggctgggagacgttcttgtcgtat
gaggatcctgagcaggacatcctgatcgggttgctgaggcttcgccgctgttctgcacag
tcttttcggccggagctaaagaacgcggtgtcgatcgtgcgtgagctgcacgtgtatggc
agtgtggtgcccataagcagccgagatcccagcaaattccagcaccagggttttgggatg
atgttgatggaggaggcggagaggatagccagagatgaacacggctccgccaaactcgct
gttatctcaggtgttgggactcggaattattacaggaagctgggatacgagctggagggg
ccatacatggtgaagtgcttggactga
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