Clarias gariepinus (North African catfish): 128515295
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Entry
128515295 CDS
T10780
Symbol
nfkbiaa
Name
(RefSeq) nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a
KO
K04734
NF-kappa-B inhibitor alpha
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04210
Apoptosis
cgar04620
Toll-like receptor signaling pathway
cgar04621
NOD-like receptor signaling pathway
cgar04622
RIG-I-like receptor signaling pathway
cgar04623
Cytosolic DNA-sensing pathway
cgar04625
C-type lectin receptor signaling pathway
cgar04920
Adipocytokine signaling pathway
cgar05132
Salmonella infection
cgar05168
Herpes simplex virus 1 infection
Brite
Transcription factors [BR:
cgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
128515295 (nfkbiaa)
Membrane trafficking [BR:
cgar04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
128515295 (nfkbiaa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128515295
NCBI-ProteinID:
XP_053345389
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Position
27:complement(22849380..22852213)
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AA seq
323 aa
AA seq
DB search
MDFHKSNTRNNQVDFMDEMDPKNAKHTDDRLDSGMDSLKEDEYQQIVQDLEDLELERDRL
KIVSCPSPWKHEVTEDGDTYLHLAIIHEAENEALQIIKHCVNDPFLNSQNHQRQTALHLA
VITEQPHIIEMLLKAGCDPRLVDQNGNTALHIACRKGSLSCFAVLTQINTHHLRTILSVV
NYSGHTCLHIASICSFLSLVENLVQLGADINAKEQCSGRTCLHLAVDLQNLPLVQQLIAL
GADVNSMTYGGHVPYHLTFGRQNAEIQQQLFDRTAFDLRHFPESESESEDELMSDDECVY
DDIYFVGKGSVHSNPNSRSYVFP
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggattttcacaaaagcaatacgaggaataaccaagtggactttatggacgaaatggac
ccgaagaacgcaaaacacaccgacgatcgcttggacagcggcatggactcgctaaaggag
gacgagtatcagcagattgtgcaagacttggaggacctggaactggagcgggacagactg
aaaattgtgtcctgcccttcgccctggaagcacgaagtgaccgaggatggagacacgtat
ctgcacctcgcaatcatccacgaggctgagaatgaagcgctccagatcatcaagcactgc
gtcaacgacccgttcctcaacagccagaaccaccagagacagacggcgctccacttggcc
gttatcacagagcagcctcacatcatcgaaatgctcctgaaggccggctgcgaccctcga
ttggtcgatcagaacgggaacacggcactccacatcgcctgcaggaaaggctcgctgtcc
tgtttcgccgttctgacgcaaatcaacacacatcacctgcgcaccatcctgtccgtcgtc
aactacagtggacacacgtgtctgcacatagcgtccatctgcagcttcctgtcattggtc
gagaacctggtgcaactgggtgcagatataaatgccaaggaacagtgtagcggtcgcaca
tgtctccacctcgctgtggatctccagaatctccctctggtgcagcagttaatcgctttg
ggcgccgacgttaacagcatgacctacggcggccatgtcccctatcacctgacattcggt
cggcaaaacgcagaaatccagcaacagctgttcgacaggacggcgtttgatctgcgtcac
tttcccgaatccgagagcgagagcgaggacgagctcatgtccgacgatgaatgtgtgtac
gatgacatttattttgtcggaaagggaagtgtacactcaaatcccaacagcaggagctac
gttttcccatga
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