Clarias gariepinus (North African catfish): 128515324
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Entry
128515324 CDS
T10780
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03410
Base excision repair
cgar04210
Apoptosis
cgar04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128515324 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128515324 (parp1)
04217 Necroptosis
128515324 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgar03032
]
128515324 (parp1)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128515324 (parp1)
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128515324 (parp1)
Enzymes [BR:
cgar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
128515324 (parp1)
DNA replication proteins [BR:
cgar03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
128515324 (parp1)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
128515324 (parp1)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
128515324 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
MFAP1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
128515324
NCBI-ProteinID:
XP_053345439
LinkDB
All DBs
Position
27:18000764..18029891
Genome browser
AA seq
1022 aa
AA seq
DB search
MADSQDDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RASVQSTSDISGFADLRWEDQEKVKKAMEGGGSVSGKAGGKGAGKGVKSLTDFAVEYAKS
NRSTCKGCEQKIEKDQIRVSKKAVDPEKPQLGLIDRWYHTGCFVSRREELVFKPEYNASQ
LKGFAALRAEDQAELKERLPVVKAEGKRKADSVDGVSKKQKKEEEEEKKQLEMRLKEQSQ
LIWGIKDKLKKYCSTNDMKELLIANGQDVPSGEANILDRLSDCMAFGVLKPCETCQGQLV
FKSDAYYCTGDISAWTKCVFKTQTPNRKDWITPKEFHEISFLKKFKFKRQDRLFPKEPPA
ATATAPTSSAAAPAHGSAASGASSSSFPTELPTEVNADKPLTGLKVLTLGKLSKNKDELK
TVVEELGGKITSTVNKATFCLSSTKEVEKMSKKMEEVRDAGIRVVAEDFLTDIKSSGKAL
RELISLHGISPWGAEVKLEAQASSAAAKSSGATKSSGRSKEDEGSSKSKKMKLTVKGGAA
VDPDSGLEDCAHVLDQNGKIYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRV
GTTIGGNKLEKFYDKNSAMDNFRSVYEEKTGNCWTSSSFTKYPNKFYPLEIDYGQDEEAV
KKLTASSGTKSRLAKPVQELIRMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSL
LTEVQQAVSDSAPEAVILDLSNRFYTLIPHDFGMKKPPLLSNLDYIQAKVQMLDNLLDIE
VAYSLLRGGTEDNEKDPIDINYEKLKTKIEVVDESSEEARIIRQYVANTHAATHNTYTLE
VEEIFKIERDGEYQRYRPFKELPNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFG
KGIYFADMVSKSANYCHTSQADPVGLILLGEVALGNMHELKKASHITKLPKGKHSVKGLG
KTAPEPSATVSLNGVDVPLGKGVNTNIDDTSLLYNEYIVYDISQVNLKYLLKLRFNYQTS
LW
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcacaggacgacaagctgtacaaggctgagtatgcgaaaagcgggcgcgct
tcgtgtaagaagtgtaaagagaacatcgcgaaggactcgctcaggatggccatcatggtg
cagtcgcccatgtttgatggtaaagtgccccactggcatcatttctcctgcttctggctc
cgcgcgtctgtgcagtcgacgtcagacatctcgggctttgccgacctccgctgggaggac
caggagaaagtgaagaaggccatggaaggaggagggtctgtctctggtaaagctgggggt
aaaggagcaggtaaaggagtgaagtctctgactgactttgcagtggagtacgcaaaatca
aacaggagcacctgcaaaggctgtgagcagaaaatagaaaaggaccagatccgcgtctca
aagaaagcggtggacccggagaagcctcagctgggtctgatcgaccgctggtaccacacg
ggctgcttcgtgagccggcgcgaggagctggtgttcaaacccgagtacaacgcgtctcag
ctcaaaggcttcgccgctctgcgtgccgaggaccaggccgagctgaaggagagactccct
gttgtcaaggctgaggggaaaaggaaagccgactctgttgatggagtttctaagaagcag
aagaaagaggaggaagaggagaaaaaacagctggagatgaggctgaaggagcagagccag
ttgatttgggggattaaagacaagctgaagaagtactgctcgaccaacgacatgaaggag
cttctgatcgccaacgggcaggacgttccctcaggggaagccaacatcctggaccgtctg
tcagactgcatggctttcggcgtgttgaagccgtgtgagacgtgtcagggtcagctcgtg
tttaagagcgacgcctactactgcacaggagacatctccgcctggaccaagtgtgtgttt
aagactcagacacccaaccgcaaagactggatcacgccgaaggagttccatgaaatttcc
ttcctgaagaagttcaagttcaagcgccaggaccgtttgtttcccaaagagcctccagct
gctactgctaccgctcctacctcgtctgcggctgcccctgctcacggctcggctgcttcc
ggcgcctccagctccagttttccgaccgagctccctacggaagtgaacgcagataagcca
ctgactgggctgaaggtgctgactctcgggaagctgagcaagaacaaggatgagctgaaa
actgtagtggaggagctgggaggaaaaatcaccagcactgttaataaagccaccttctgc
ctcagctccacgaaggaagttgagaagatgagtaagaagatggaagaggtgagggatgcc
ggcattcgtgtcgtcgccgaagacttcctgactgatatcaagtcctcgggcaaggcgctc
cgcgagctcatctccctgcacggcatctcgccctggggcgccgaggtcaaactcgaggcc
caggcttcatcggcggccgcaaagtccagcggagccaccaaaagctcgggaagaagcaaa
gaggacgaaggcagcagcaagtcgaagaagatgaagctgacggttaaaggcggagcagca
gtagatccggactcaggtctggaggactgcgctcacgtgctggatcagaacgggaagatc
tacagcgctacactgggcctggtggacatcgtccgtggaacaaactcctactacaaactt
cagctcctggaggacgacgtacagaaacggtactgggtgttcaggtcctggggtcgagtt
gggaccacgatcggaggaaacaaactggagaagttttatgacaagaactcggccatggac
aacttccgcagtgtgtacgaggaaaagacgggcaactgctggacctcgagcagcttcacc
aaataccctaacaagttttatcctctggagattgactatgggcaggacgaggaagcggtg
aagaagctgaccgccagcagcggcaccaagtcccgactcgccaaaccggttcaggagctg
atccgcatgatcttcgacgtggagagcatgaagaaggccatggtggagtttgagatcgac
ctgcagaagatgcctttggggaaactgagtaagaggcagatccagagtgcgtactctctc
ctcactgaggtccagcaggccgtgtccgatagcgctcctgaggctgtgattctggacctg
tccaatcgcttctacactctgatcccgcatgacttcggcatgaagaaacctccgctgctg
agtaaccttgactacattcaggccaaagtgcagatgctggacaacctgctggacattgag
gtggcgtacagcctcctgcgcggcggaaccgaggacaacgagaaggacccgatcgacatc
aactatgagaagctcaagacaaagatcgaggtggtggatgaatcgtcagaggaagcccgg
attattcgacagtacgtggcgaacacgcacgccgccacgcataacacctacaccctcgag
gtggaagagatctttaagatcgagagagacggggagtaccagcgttaccgccccttcaaa
gagttaccgaaccgccagctcctgtggcacggctcgcgcgcaactaactacgctggcatc
ctgtctcagggtctgcgcatcgccccgcccgaggctcctgtgacaggttacatgttcggt
aaaggtatatactttgctgacatggtgtctaagagtgcaaactactgccacacgtcccag
gcggatcccgtaggcctcatcctgttaggagaagtcgcgctcggcaacatgcacgagctt
aaaaaggcttcacacataacaaaattaccgaaagggaagcacagtgtgaagggcttggga
aagaccgcacctgagcccagtgcgacggtctctcttaacggagtggacgtgccgctgggc
aaaggcgtcaacacgaacattgacgacacgagtctgctttacaacgagtatatcgtgtac
gatatctctcaggtgaatctgaaatatcttctgaaacttcgcttcaattatcagacgtcc
ctctggtga
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integrated database retrieval system
