Clarias gariepinus (North African catfish): 128515327
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Entry
128515327 CDS
T10780
Symbol
lft1
Name
(RefSeq) lefty1
KO
K04668
left-right determination factor
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128515327 (lft1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgar04052
]
128515327 (lft1)
Cytokines and neuropeptides [BR:
cgar04052
]
Cytokines
Transforming growth factors (RSTK binding)
128515327 (lft1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
128515327
NCBI-ProteinID:
XP_053345443
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All DBs
Position
27:1164971..1166887
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AA seq
358 aa
AA seq
DB search
MAFVLASHFLCALFLAQTAAFTHDDMKDALLKKLGLSEVPHIHKRDLENLVVPAHIKNKY
VSMLKLHHDRRRRALPSLAGILRGIPGNADISGEFVYSDTTRQRVVFEMNSRIPDNSEVT
MAELKLYKKAPHKRSMPERKGQRAVSNARVSIYWVELLGDGSNRTSLVDSRLVPIHESGW
KSFDVTQAVHYWSRSERTSPMHLEVWIEGERPGSYAAEMAKSVQFTSQEPSDVLGKPELV
LYTLNLEEFGSNGDCDPDRSKDMCCREEYFINFRALTWTQYWVIEPAGYQAFRCAGACRQ
PQRGLYTYGQRKCAVVESAPLPIMYLVKKGDYTEIEVAEFPNMIVEKCGCAMDNTSLV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgttctcgcctcccacttcctctgcgcgctctttctggcacagacagcagcc
ttcacacacgacgacatgaaggacgccctgctgaagaaactgggactgagcgaggttcct
cacattcataaacgggacctggagaacctcgtggtgccggcgcacatcaagaacaagtac
gtgtccatgctgaagcttcaccacgatagaaggcgccgcgcgctccccagtttagcggga
attttacgcggcatcccggggaacgcagacatctctggagagttcgtgtattctgatacg
acccgtcagcgcgtggtgttcgagatgaactcgaggattcccgacaacagcgaggtgacc
atggccgagctgaagctgtacaagaaagcgccgcacaagcgctccatgcccgagaggaag
ggtcagagggcggtgagcaacgcgcgggtcagcatctactgggtggagttgctgggcgac
ggctcgaaccgcacctccctggtcgactccaggttggttcccatccatgaatcgggctgg
aagagcttcgatgtcacgcaggctgtgcattactggtcgaggagtgagcggacctcaccc
atgcacctggaggtgtggatcgagggcgagagaccgggcagttacgcggcggagatggcc
aagagcgttcagttcacatcccaggagccgagcgatgtcctgggcaaacccgaactcgtt
ctctacacactcaaccttgaggagtttggttctaacggagactgcgatccagacagaagt
aaggacatgtgctgccgcgaggagtacttcattaactttcgcgctctgacctggacccag
tactgggtgatcgagccggcggggtaccaggcgttccgctgtgcgggggcctgcaggcag
cctcagcgcggcctttacacctacggccagaggaagtgcgcggtggtggagagcgccccg
ttgcccatcatgtacctggtgaaaaagggcgattacaccgagatcgaagtggccgagttt
ccgaacatgatcgtggagaagtgtggctgcgccatggacaacacgtctctggtgtga
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