Clarias gariepinus (North African catfish): 128515334
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Entry
128515334 CDS
T10780
Symbol
dtl
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128515334 (dtl)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
128515334 (dtl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
NBCH_WD40
WD_LRWD1
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
128515334
NCBI-ProteinID:
XP_053345452
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All DBs
Position
27:12924888..12936309
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AA seq
630 aa
AA seq
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MLFRYVVDRGVGKRRSNDKHVDYPLSSLLECFQCTRHDEHVSYGDSGVAVPPFGCTFSTA
PGQGSTLAVANEEGIVSLYNTETRSTVLKQWLAHDNAVFDIAWVPGANSLVTASGDQTAR
LWDVISGELLGNFKGHQCSLKSVAFPKREKAVFCTGGRDGNIMLWDMRCSKKDGFYRQVK
QISGAHMKVERNTPQTKKKRATSKGMAPSVDSQRGVTAVIFRDENTLISSGAVDGMIKMW
DLRKSYTAYQQNLNPLQSYQYPGSSTRKLGYSGLTLDSTSSRLFCNCTDDNIYMFDVSGL
KTTPVSVFSGHRNSSFYVKSSVSPDDQFLASGSSDGHAYIWKICDPARAPVMLQGHSQEV
TSVTWSPFDFTKIATCSDDDTVRIWRLSRSEDGESKAGDLNLVGRARRKIQTPPRPSGSS
PHSDLTPVRSGRSGSIDSLLSPRPGSCAPSGADFPSPSVTSSPADTPCPSQTKSPLTIPV
INTLTSERRAKRRLDTSETTTAVAGEDESDGVSELYPDCKRSRESASTFSTSAEKEERVG
SSAQADKENSSPVKADWLSAMSRKFKQSQSGAGLPKSPNGVKRQDSRTPSFSALSSPQSL
KKASSPQTKRTSSPASTKKISAYFQKPPQD
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcgttatgttgtcgatcgaggagtgggtaaaagaagaagcaacgataagcat
gtggattacccgttgtcctccctgttggagtgtttccagtgcacccggcatgatgaacac
gtgtcgtacggagactcgggtgtcgcagttcctccgttcggatgcacgttctccacagct
cctggacaaggcagcaccctggctgtagcgaatgaggaagggattgtgagtctttacaac
actgagacacgcagcactgtactgaaacaatggctggcgcacgataacgctgtgtttgat
atcgcctgggtcccaggagcgaacagcctggtgacggcgtcgggggatcagacggcccgg
ctgtgggacgtgatctccggggagctcctgggaaactttaaagggcatcagtgcagcctg
aagagtgtggcctttcccaagcgagagaaagctgttttctgcactggaggtagggacggg
aacatcatgctgtgggacatgaggtgtagtaagaaagacggcttctacaggcaggtgaaa
cagatcagtggagctcacatgaaggtggaaagaaatacaccgcaaacgaagaaaaaacga
gcgacgtccaaaggcatggctccttctgtggactctcagagaggtgtgacggctgttatt
ttccgcgacgagaacacgctcatctcgtcaggagctgtagacgggatgattaagatgtgg
gatctgaggaaaagttacacggcgtaccagcagaacctcaatccactccagagctatcag
tacccaggatcgtccacacgcaaactaggttattcaggcctgacgttagactcgacgagc
tccaggctgttctgcaattgcacagatgacaacatttacatgttcgatgtcagtggatta
aaaacgacaccagtgtccgtgttcagtggacaccgtaactcctcgttctacgtgaagtcc
agcgtgagtccagacgatcagttcctggccagtgggtcaagtgatggccatgcttatatc
tggaagatctgtgacccggctcgagctcccgtgatgcttcaaggtcacagtcaggaagtg
acgtcagtcacctggagcccatttgattttacgaagatcgcgacctgctccgatgacgac
acggtacggatctggaggctcagccgcagcgaagacggagaatcaaaagcaggagattta
aacctcgtaggccgggcacgccgcaaaatccagacgccgccccgaccctcgggctcctcc
cctcattctgatctaacccctgtacggagcggcaggtcaggcagcatcgactctctgttg
tcccctcggcctggctcgtgcgcccccagcggtgcagactttccttctccatctgtcacc
tcctcacctgctgatacaccctgtccatcccagaccaaatctccccttaccatccccgtc
attaacacgctgacctccgagaggcgagccaaacgccgcctggacacgagcgagacgact
acggcggtggcgggggaagacgagagcgacggggtgtctgagctctatccggactgtaag
aggagtcgggagtctgcgagcactttcagcacatcagcagagaaggaagagagggtgggt
tcatctgcgcaggccgataaggagaacagctcgccagtgaaggccgactggctttctgca
atgagccggaaatttaaacaatctcagagcggagccgggttacctaaaagccctaacgga
gtgaaaagacaagactcgaggacaccgtccttctctgcgctgagctctccccagtctctg
aagaaggcctcctctccacagacaaagcgcacgtcctctccagcctctaccaaaaagatt
tctgcatattttcagaaaccaccacaagactga
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