Clarias gariepinus (North African catfish): 128515349
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Entry
128515349 CDS
T10780
Symbol
vamp4
Name
(RefSeq) vesicle-associated membrane protein 4 isoform X1
KO
K08513
vesicle-associated membrane protein 4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128515349 (vamp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128515349 (vamp4)
Membrane trafficking [BR:
cgar04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
128515349 (vamp4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
RIFIN
DUF5345
ATG16
MCU
DUF4407
Ferlin_C
DUF2721
Fzo_mitofusin
GP41
Orf78
Motif
Other DBs
NCBI-GeneID:
128515349
NCBI-ProteinID:
XP_053345472
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Position
27:complement(4339887..4356508)
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AA seq
153 aa
AA seq
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MREPEREEQTDATMPPKFKRHLNDDEVTGSVRSERRNLLEEDSDEEEDFFLRGPTGPRFG
PQNDKIRQVQSQVDEVIDVMQENISKVIERGERLEDLQDKSESLSDNASAFSSRAKQLHR
RMWWRDVKMKMIVALVIVIVLLIIIIPVILRYH
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgagggagccagagagggaggagcagactgacgccaccatgcctcccaaatttaagcgg
cacctgaacgatgacgaggtcaccggctctgtgcgcagtgagaggaggaacttgctggag
gaagactctgatgaggaggaagacttctttttaagaggaccaactggacccaggtttggc
ccccagaatgacaaaatcagacaggtgcaatctcaagttgacgaggtcatcgatgtgatg
caggagaacatctcgaaggtgatcgaacgcggagagcgcctagaagacctgcaggataaa
tctgagagcctgtcggacaacgcgtctgcgttcagcagccgggccaaacagcttcaccgg
aggatgtggtggagggacgtaaagatgaagatgatcgtggcgttagtgatcgtcatagtg
ctgctcattataattatccctgtgatactacggtatcactag
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