Clarias gariepinus (North African catfish): 128515704
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Entry
128515704 CDS
T10780
Symbol
jarid2b
Name
(RefSeq) protein Jumonji
KO
K11478
protein Jumonji
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128515704 (jarid2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128515704 (jarid2b)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
128515704 (jarid2b)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
128515704 (jarid2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
128515704
NCBI-ProteinID:
XP_053345807
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All DBs
Position
28:8620131..8723413
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AA seq
1272 aa
AA seq
DB search
MSKDRPKRNIIQKRRDDDSDGIPWSEEQVVRKVLYLSLKEFKSAQKRQLCDGLSDGAKSP
NGSLSSVNGPGSKGGHKGDDSRSQSTDGGSEYWEDGPVKKRPRLQAQRKFAQSQPNSPSS
TPVKMADPSLPTPVSQITDLSRCKPKTEDFLTFLCLRGSPALPSNMAYFGSSQDEDELED
DEECEEEKPPSVASTSCQSTPRKGKPPGRLNGHVFNGHTKVMKERESTLRPKVRESSVGK
ERSERTEERRDVAQSTTTRSHTSNGVGIKGTTEELRKQVSKVNGFSQPSPGTVATAKKSK
DCRLPSRTVKYTVTVTKGHVTYTKAKGELVKKAKLNHSKHSAAAAAGGNQHPASNGHGAQ
PPHSGKAPSGNAKTRKQVLLSNGLHGAANGGATVHFNGRINGLHSSKDDESEDEARQGRQ
GLRNSKRRMDAGSEATESKSKVLLSEAKKPKLASLPVVETRSKKVLNQDKASTALANGHN
ITETAASPTPKTGPTPAPASPAAPGSAHQSPANPEPARQRPKRASAGRLMFIHRAQQRAK
SWHANSNANTTSNSRPLSGSEPQTTPQRLEREREREKEREKERERSRAGLAVLPEVPILR
PNSREFQDPLVYLDSVRECAETSGLCRVIPPPDWRPECKLNDEMRFVTQVQRVHKLGRRW
GPNVQKLACIKKHLKSQGISMEEPPLIGGCEVDLARFSELVSDMGGMQRVMDLKKWSRLA
DLLRIPRSAQDRLAKLQEAYLQFLLSYDQLSPHEHRRLEHEVLGEKDTLERRRGPLEGHS
ESGYGHALALPRYEPKNGLHGPGKEPETPRNPGRRRLFSHEKKKEGHVQEEGNEGVLSDQ
HKCIYKGRSVSLTTFYRIARNAMMMCFNKEPRASEVEQEYWRIVEQRDCHVAVHYGKVDT
SIHGSGFPVGKSEPFSKHGWNLTVLAHNSGSILRHLGAVPGVTVPWLNIGMVFSTSCWSR
DQNRLPYIDYLHTGADCIWYSIPAEEKAKLDKVVHTLLQANGTPGLEMLEKNIMISPEVL
SREGIKVHRTVQQSGQFVVVFPGTFVSRVCCGYSVSETVHFATPQWMNLGYEAAKDLKCR
RIAKPFSMEKLLYQIATAEAKRENALLLSTISSLLKDLRNIEMRQRQDLYEAGLLSSARY
GTHDNGHADNRKKPRKWPALESSERRCQMCQHLCYLSMVVQENENVVFCLECALRYVQRN
KSCRGLKMMYRYDEEQINSLVNLVCCKAMKSSAESCNGSSPNKTPTKRRPRKGPTIELTL
TRLGKNTTLAVS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggacagaccgaagaggaacatcatccaaaagagaagagatgacgacagcgat
gggatcccctggtcggaagagcaagtggtgcggaaggtcctctatctctcgctgaaggag
tttaagagcgcgcagaaacggcagctctgcgacggcctcagcgatggagccaaaagccca
aacggttctctctcgagtgtcaacggtcccggctctaaaggaggacacaaaggggacgac
tctcgctctcagagcacggacggagggagcgagtactgggaagatggaccagtcaaaaag
agaccccgactgcaggcccagaggaaattcgctcagtctcagcccaactctcccagcagc
actccggtgaagatggccgacccgtcattgcccacaccagtttcgcagatcaccgatctc
tccagatgcaagcccaagaccgaggacttcctcactttcctctgccttcgaggctccccg
gctttacccagtaacatggcctactttggcagctctcaggatgaggacgagctggaggac
gatgaggaatgcgaggaggagaagccgcccagcgtggcgtccacatcgtgccagtccacg
ccacgcaaaggcaaaccgcccggcagactcaacggacatgtgtttaatggccacaccaag
gtaatgaaggagagggagagcacgctgaggcccaaagtcagagagtcttcggtgggaaag
gagcgttcagagaggacggaggagcggcgagacgtcgcacaatccaccacaaccagatct
cacacctccaacggggtcggcataaaaggaaccacagaggaactacgcaagcaggtctct
aaagtgaacggcttttcgcagccatctcctgggaccgtggccactgccaaaaagtcgaaa
gactgccgcctaccctccagaactgtgaagtacacggtcaccgtgaccaagggccacgtc
acctacaccaaagcgaaaggagaactggtaaaaaaagccaaactgaatcacagcaaacat
tctgctgctgctgctgctggcggtaatcagcatccagccagcaatgggcacggtgcccag
ccccctcactcagggaaagccccaagtggcaatgcaaaaacccgcaaacaggtgctgtta
tcaaacgggctgcatggcgcagccaacgggggcgccactgttcacttcaacgggaggatc
aatggactccatagctccaaggacgatgagtcggaggacgaagcccgccagggacggcaa
ggtctgcgcaattccaaacgcagaatggatgcaggatcagaggccacagagtccaagtcc
aaggtcttgctctctgaggctaaaaagcctaaactggcgtcacttcctgtagtggagacg
cgcagcaagaaggtgctaaaccaagacaaggcttcaaccgcccttgctaatgggcacaac
attacagaaacagctgcctcacccacaccaaaaacaggccccacccctgctccagcctca
ccagctgccccaggctccgcccaccagagcccagccaacccggagccggcaaggcaacgg
cccaagcgtgcttcagccgggaggctgatgttcatccacagagcgcagcaaagggcaaag
agctggcacgctaactctaatgctaacactacctcaaacagcaggcccttgagtgggtca
gagcctcagaccacacctcagcggttggagcgggagcgcgagagggaaaaggaacgcgaa
aaggagcgtgagagaagccgggcaggcctggcagtgctgcctgaggttcccatattgagg
cccaactcgcgcgagtttcaggaccctctggtttacctggactcggtgcgagaatgcgca
gaaacgagtggactatgccgagtaatcccgcctccagactggcgtcccgagtgcaagctg
aacgacgagatgcgcttcgtcactcaggtgcagcgggtgcacaagctcggtcgccgctgg
ggcccgaacgtccagaaacttgcgtgtatcaagaaacacctcaaatctcagggcatcagc
atggaggagccgccacttatcgggggctgtgaggtggacttggcgcgattctccgagctg
gtcagcgacatgggtggcatgcagcgagtgatggacctgaagaagtggagccgtttggcg
gatctgctccggatcccgaggtcggctcaggatcggctggctaagctccaggaggcctac
ctgcagttcctgctctcttacgaccagctctctcctcatgagcatcgccgtctcgagcac
gaggtgctcggcgagaaggacacgctggagcgccgccgggggcccctggagggtcactcg
gagagcgggtacggtcacgccctggcgctgccacgctacgagcccaagaacgggctccac
ggaccgggcaaggagccggagacgccccgtaaccctgggcgccgtcgactctttagtcac
gagaagaaaaaagagggtcacgtccaagaggaaggaaacgaaggggttctcagcgaccag
cacaagtgtatatataagggtagatcggtgtctttgaccactttctacagaatagccagg
aatgcgatgatgatgtgctttaataaggagcccagagcatcggaagtcgagcaagagtac
tggcgaatagtggagcagagggactgccacgtagcggtgcattatgggaaagtggacacg
agcatacacggaagcggcttccccgtgggcaagtcggagcctttctcaaaacatggatgg
aacctcactgtcctcgctcacaactccggctccatcctgcgccacctcggtgccgtgccc
ggggtgactgttccctggctgaacattggcatggtcttttctacctcatgctggtcacga
gaccaaaaccgccttccatacatcgattacttacacactggtgctgactgcatttggtat
tcgattcctgctgaggagaaggctaagcttgataaagtagtgcacacgctgctgcaggcc
aacggcacaccgggactcgagatgctggaaaagaacataatgatctctccagaggtgctg
agtcgcgaggggattaaagtccaccgcacagtgcagcagagcggacagttcgttgtggtt
ttccccgggacgttcgtctccagagtgtgctgcggttacagcgtgtccgagaccgtacac
ttcgccacgccgcaatggatgaacctgggctacgaggctgccaaggatctgaaatgcagg
cggatcgcgaaacccttctccatggagaagctgctgtaccagatcgccacggccgaggcc
aaacgagagaacgcacttctgctgagtacaatctcctctcttctcaaagatctcaggaac
atagagatgaggcagaggcaggatctctatgaggccgggctgctctcctctgctcgctac
ggcactcacgacaacggccacgcagacaacaggaagaaaccacgcaagtggcccgcgctc
gaatcgtcagagagacggtgccaaatgtgccaacacctctgttacctgtccatggtggtg
caggagaacgagaacgtggtgttctgtctggagtgtgctctgcgctacgtccagagaaac
aaatcctgtcgtggactgaagatgatgtaccgctacgacgaggagcagatcaacagtttg
gtgaatctggtgtgctgtaaagccatgaagagctcagcggaaagctgtaacggctccagc
cctaacaaaaccccgaccaagcggcgtccgagaaagggccccaccatagagttgactctc
acccgcttgggcaaaaacaccaccttggctgtctcatga
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