Clarias gariepinus (North African catfish): 128515712
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Entry
128515712 CDS
T10780
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128515712 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgar03021
]
128515712 (sfpq)
03041 Spliceosome [BR:
cgar03041
]
128515712 (sfpq)
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128515712 (sfpq)
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128515712 (sfpq)
Spliceosome [BR:
cgar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128515712 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
128515712
NCBI-ProteinID:
XP_053345823
LinkDB
All DBs
Position
28:12645955..12669320
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AA seq
603 aa
AA seq
DB search
MSRDRFRNRGGGFQQRGRGGSGGAGGMRGGMGNPNFRNNPQHPFQNRGPQPGGGVGFNKP
NQGNQANQGTPQKPEGTNVAPKPEMKSPPPPQQQQPQQPDAQNKAQAPQQQPQQEIQPPP
APQLQSPPTKNVTPKPEPLTPQNQPRKNQQKTPGSGNFNQKPPESGGQPSGGPDSAEKQE
LRAALSMLRKPGEKTYTQRCRLFIGNLPNDITEDEFRRLFSKYGEPSEIFINQGKGFGFI
RLESRALAEIAKAELDDKPMKGRPLRVRFATHSAALSVRNLSPYVSNELLEEAFSQFGVV
ERAVVVVDDRGRSVGKGIVEFATKPAARKALDRCKDGVFLLTSSPRPVVVELMDQFDDED
GLPEKLAQKNPSYQKERENPPRFARPGTFEFEYSQRWKSLDEMEKQQRQQVEKNIREARE
KLEADMEDAYHEHQANLLREDLLRRQEELRRMEEMHNQEMQKRKEMQISFLFGRQEEERR
RREEDMMRQREMEEQMRRKREESYRMSGFMDNRDREMRMGSGGLGLADMPFGANNQKFPL
ARMGFDAHQGLGGPVAGGMVPNEMHNERFPQGGPAGPRGMGPGNSGFGRVREEFEGPAKK
PRF
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtgaccgtttcaggaatcgcggcggtggatttcagcagcgaggccgaggaggc
agcggcggagcaggaggaatgcggggcggaatgggaaacccaaattttcgaaataatcca
cagcacccatttcagaaccgcggccctcagcctggaggtggagttggttttaataaaccc
aatcaaggaaatcaagcgaaccagggaacaccgcagaaaccagaggggactaatgttgcc
ccgaagcctgagatgaagtcaccccctcctcctcagcaacagcaaccgcagcagcctgat
gcacagaacaaggcacaggccccgcagcagcaaccacaacaagaaatacaacctcctcca
gcaccacagttacagtcacctccaacgaaaaatgtcactcccaaaccagagcctttaaca
ccacagaaccaaccccggaaaaatcaacaaaagacgccaggcagtggaaatttcaaccag
aagcctccggagagtggaggccagccctcgggtggaccagactccgctgagaagcaggaa
ttaagggcagcactctcaatgctgcgcaaacctggggagaaaacgtacactcagagatgc
cgactgttcatcggcaacctgcccaacgacatcaccgaagacgagttcagaagattattt
tctaaatatggagagccaagtgaaatcttcatcaaccaaggcaaaggttttggcttcata
cgtctggagtcacgtgctttagcagagattgcaaaggccgaactagatgataaaccaatg
aaaggcagacccctcagggttcgcttcgccacccattcggctgcattatctgtccgcaat
ctgtccccatatgtctccaatgagcttctcgaggaggctttttcacagtttggagtcgtc
gaaagggcggtggtggttgttgatgatcgaggacggtctgttggaaaaggcattgtcgag
tttgctaccaagcctgcagctcgaaaagctcttgatcggtgcaaagatggagtcttccta
ctcacatcgtcaccacgtccggttgttgttgagctgatggatcagtttgatgatgaggac
ggtctgccagagaagcttgcccagaagaacccaagttatcagaaggaaagagagaaccct
ccacgttttgccagaccaggcacttttgagtttgaatactcacagcgttggaagtctctg
gatgaaatggagaaacagcagagacaacaggtggagaaaaatatccgtgaggctcgggag
aagctggaggcagatatggaagatgcctaccacgagcaccaagccaacttgcttcgtgaa
gacctacttaggcgacaagaggaactgcgacgcatggaggagatgcataatcaggaaatg
caaaaacgcaaagagatgcagattagctttctatttggcaggcaagaggaggagcggcgc
agacgagaagaggacatgatgcgacagcgagaaatggaggagcagatgaggcgcaagcgt
gaggagtcctacagaatgagtggtttcatggacaatagggatagggagatgaggatgggt
tctggaggtctcggattggcagatatgccttttggcgctaacaaccagaagttcccattg
gccaggatgggctttgatgctcatcagggactcggtggaccagtggcagggggcatggtg
cccaacgaaatgcacaatgagcgtttccctcaaggcggccctgcaggtccgaggggtatg
ggtcctggcaattcaggattcggcagagtccgtgaggaattcgaaggacctgccaagaag
ccacgcttctga
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