KEGG   Clarias gariepinus (North African catfish): 128515716
Entry
128515716         CDS       T10780                                 
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
  KO
K11653  AT-rich interactive domain-containing protein 1
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    128515716 (arid1ab)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cgar03000]
    128515716 (arid1ab)
   03021 Transcription machinery [BR:cgar03021]
    128515716 (arid1ab)
   03036 Chromosome and associated proteins [BR:cgar03036]
    128515716 (arid1ab)
Transcription factors [BR:cgar03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    128515716 (arid1ab)
Transcription machinery [BR:cgar03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     128515716 (arid1ab)
Chromosome and associated proteins [BR:cgar03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    128515716 (arid1ab)
SSDB
Motif
Pfam: BAF250_C ARID
Other DBs
NCBI-GeneID: 128515716
NCBI-ProteinID: XP_053345828
LinkDB
Position
28:complement(19195546..19241111)
AA seq 2213 aa
MAAQVAALSTSPAAELKKADAHEDALPGETTQHESAETGGQKELQDGADAPGGGGGGGGG
RRGGGGDPELKNGNDNSSRNNNNNNNNLDAGVAPPHHHNQQQHPHPGAFPPPPYGGSQHY
TRGPFHQHGGQQSPGMAPGLPGGVMEQYPGNSHEHGFSNHYGPFPNRTQYQGQGYGMNSP
RANQPGKPGATLMAFNNQRYNMNNPQPTPTPTLNQLLTSPAAGGRSYQNYPQTDFNAQDG
TGKSAGELSGTNHYAGGHAPWQQRGHHASPGSTAHALNRNQTPTPMDQVGKIRGQHFGAG
NPYSQQQGPAPGAQQGPPYPGQGYGSPGTQRYPMGMQGRTPGAVGGLQYGQQMGYGQQGP
GAYGQGQGGYYGQQHPLTPHGGLPQGSYPQQHPSGPGSQHPYSQSPSGPPYSQQPQAQTS
YPQTPHSQAGQPSYPQPQTVLQSQSAQGPQQPQQQPGFPQASPGSGQPPAPPVPPSSQTQ
QQQQGSTQQQQQPSVGPPQQSQQPMGHSAPPQGHSPYSQTPPTQTPQQTTPFQRFPPPQQ
ELSQDSFSSHASGPTSNTPLASSKSGTEDSMQGRPSSLPDLGSIDDLPTGTEGALSPGVS
TSGVSSSQGEQSNPAQSPFSPHTSPHVPGIRGPSPSPVGSPASATTSRTGPLSPAGSQMP
PRPSSVQSDGILHSSMNQAAVGQDRVYMRNTQMPAYGSPQPASALSPRPSSGGQVHAGMG
HYPQNNSMGNYGPQGAQYVPQGYPRQPGYSGMPGPNYPGGPNMGSPINPMSGQAGGGAYS
GMPPGRMVPGPGQMGSRPYGPGMSPNMAGIPPQVASGMCPPPGMNRKPQDPSSAGMHHGP
ANSVHGPAGYPAMNQAMMGAGPPYAPPINSMHGMMNQAGPYPMGGSVANNSAGMVPSPEL
EKINQNQKMNNKADGTPKTESKKKSNSSTTTNEKITRLYELGPEPERKMWVDRYLAFAEE
KAMGMTNLPAVGRKPLDLFRLYASVKEIGGLMQVNKNKKWRELATNLNVGTSSSAASSLK
KQYIQCLYAFECKIERGEDPPPDIQDPKKNQPKVQPPSPAGSGSLQGPQTPQSTCSSMTE
GNDLKPPTPASTPHSQMPPMPGVRSSVNVQDPFADGGDPAFARRNSMTPNSNFQPGMGGP
PDMMGRLGPYEPNKDPFSGMRKAGEQFMQNPGPTSGMSEQYSRGPPGPMGNMQLGHRQQY
GPYGPGYDRRQDPGMSPDGSIAPGASQPNTMPSGADTGMYSPNPQQQRHDSYVNQYPSQN
APPSGQYPSQQPGLYPQQPNYIQKRPGDGGYGPPAKRHEGEMYPFSGQQQQAPQASSGPQ
SQPQQEMYNQYNAYPGTDRRPPGPQSQFPFGFGRDRGPNAGGSNSQSSMPPQMMGSPLPS
VPDGPQGPMWQGRNDMTYPNYPNRQGPPAVPTQGPGYHAMNRSEDMLPSDQRINHEGPWP
GHVNQRQPPYGPGSSGPPMSRPLQSNFQASQNHIPQVSSPAPMPRSMGNSTSPSKSPYMQ
TGIKIQKPGSVVPASNIAPPPVQPPMMRRDVAFPPGSVEATQPILKPRRRLTTKDIGTPE
AWRVMMSLKSGLLAESTWALDTISILLYDDNSISTFSLCQLPGFLELVVEYFRKCIIEIF
GILKEYEVGDPGQRTLIDPDAPDNDMSDDEIPDGWQMDEEEVKEDKICQHMPQIQIKHEK
DDHIHDQKSSEKSEEVKFLEISSSKAREITTFLQDSSAEQDKLKQASKFDKLPIKVVWKK
DPFVIGRTGKLGRRQTFDSGLIHWSVGGGDTTEHIQTRFESKMELLKPHKPVPVNTVDLV
TEKRNKNKRSKPELQNKQQLESQPSSGQALEKENSLDVASASATTMDTAEESVRNGREKK
EETNKDKFLFGIDPSQNSNIKILEDEPHSKDESPLCTLSDWQDALARRCICVSNIVRSLS
FIPGNDCEMSKHPGLLLLLGRVVLLHHRHPERKEAPVTYEKEDEEDEGVSCEQDEWWWDC
LEVLRENCLVTLANISGQLDLSMYPESICLPLLDGLLHWAVCPSAEAMDPFPTLGLNGSV
SPQRMVLETLSKLSIQDNNVDLILATPPFSRLEKFYSSLVRLIGDRKIPVCREMAVVLLA
NLAQGDSQAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQSSLLHMQGPHIEPTSVDMMQ
RAARALHALAKVEENRSEFMLYESRLLDVSVSPLLNSGVSHVICDVLFLIGQS
NT seq 6642 nt   +upstreamnt  +downstreamnt
atggccgctcaggtcgctgcgctgagcacgagccccgccgccgagctgaagaaggcggac
gcgcacgaggacgcgctaccgggagagacgacgcagcacgagagcgcagagaccggcgga
cagaaggagctccaggacggcgcggatgcaccgggaggaggaggaggaggaggcggaggg
aggcgcggaggaggtggagatcctgagctgaagaacggtaacgacaattcgtcccgtaac
aacaacaacaataacaacaacctggacgcgggcgtcgctcctcctcaccaccacaaccag
cagcagcacccgcacccgggcgcgttccctccaccgccatacggcggcagccagcactac
acccggggcccttttcatcaacatggcggacaacaaagccctggcatggcaccggggctc
ccgggcggcgtgatggagcagtacccgggtaactcacacgagcacggcttctccaaccac
tacgggcctttcccgaaccggactcagtaccagggccagggttacggcatgaactccccg
cgcgcgaaccagccgggcaaaccaggggcaactctcatggcgtttaataatcagaggtat
aacatgaacaacccgcaaccgaccccgaccccgaccctgaaccagctcctgacctccccc
gccgccgggggcaggagctaccagaactacccccagactgactttaacgctcaggacggg
acggggaaaagcgcgggggagctgagcggcactaatcactacgcagggggtcacgcgccg
tggcaacaaagaggccatcacgcgagcccgggcagcaccgctcacgcgctcaacaggaac
cagaccccaacgccaatggaccaggtggggaagatcaggggtcagcatttcggagcagga
aacccttactctcagcagcaggggcctgcacctggggcccagcaagggcctccttacccc
gggcaaggctacggttcccccggaacacagagatacccaatgggcatgcaaggacggacc
cctggtgctgtggggggtctgcagtacggacagcagatgggttatggacagcaaggccca
ggagcttatggtcagggccaaggaggttactacggtcaacagcaccctcttactccccac
ggaggacttccgcagggttcgtaccctcagcagcaccccagtggcccgggctcccagcat
ccctactcccaatccccatcaggtcctccgtactcccagcaaccgcaagcccagacttcg
tacccccaaactccacattcccaggctggccagccctcttacccccagcctcagactgtt
ctacagtcccagtcagctcagggccctcagcagcctcaacagcagcctggattcccccaa
gcgtcgcctggttccggacagcctcctgctcctcctgtgcctccttcttctcagactcag
cagcagcaacaaggctcaacacaacagcagcagcagcccagtgtagggcctcctcagcaa
tcccagcagcctatgggtcacagtgctcctccacaggggcactcaccttactcacaaact
ccaccaacacagactccacagcagacaacgcccttccagcgcttcccgcctccacaacag
gagttgtcccaagactcatttagttcgcacgcttccggtcctacctcgaacacacccctg
gcctccagtaagagcggtacagaggacagcatgcaaggccgcccttcaagcctgccggac
ctgggctctatcgatgacctgcccacgggtacggagggggcgctgagtccgggggtcagc
acatcaggggtctccagcagtcagggcgagcagagcaacccagcccagtcacctttctcc
ccacacacctctcctcacgtaccgggcatccgtgggccttcgccatcgcctgtaggctcg
cccgccagtgccaccacttctcgcactggacccctttcacccgctggaagtcagatgcct
cccagaccttccagcgtccagtcggatggaatcctgcattcttctatgaaccaggctgct
gtgggccaggatagagtctacatgcggaacacacagatgcctgcttacggctcgcctcag
cccgcgtctgccttatccccacgcccatcatctggaggccaagtgcatgctgggatgggt
cattatcctcaaaacaactccatgggcaattacgggccacagggagcacagtacgttccc
caaggctacccgagacagccaggctacagtggcatgcctggtcctaactaccctggtggt
ccaaacatgggcagcccgataaaccccatgtcagggcaggcaggaggtggcgcgtacagc
gggatgcctcccgggcgcatggtgccggggccaggacagatgggctcaaggccgtacggc
ccgggaatgagtcccaacatggcgggcataccgcctcaagtggcctcaggcatgtgccct
ccacctggcatgaacagaaaaccgcaggatccgtcctcagcgggcatgcaccacggtccg
gcaaactccgtacatgggcccgctggttatcccgctatgaaccaggccatgatgggagcc
gggcctccgtatgcaccacctataaacagcatgcacgggatgatgaaccaggcagggccg
taccccatggggggcagcgtggccaacaactcagcaggtatggtgcccagccccgagttg
gagaagatcaaccaaaaccagaagatgaataataaagccgatgggactccgaaaaccgaa
tcaaaaaagaagtccaattcgtccaccaccacaaatgagaaaatcactcgtctgtatgag
ctgggtcctgagcccgagaggaagatgtgggtggaccggtacctggcgttcgccgaggag
aaagccatgggcatgacgaacctgccggcggtgggacgcaagcctctcgacctcttccgt
ctctatgcgtctgttaaagagatcggcggccttatgcaggtaaacaagaacaaaaaatgg
agggagttggcgacaaacctaaatgttggaacctccagtagcgcagctagctccctaaag
aagcagtacattcagtgtctgtatgcctttgagtgtaaaatcgagcgtggtgaggaccca
ccgccagacattcaagaccccaaaaagaaccagccgaaggtacagccaccctctccagcc
gggtctggatctttacagggccctcagactccacagtcgacttgcagctccatgactgag
ggaaatgatttaaaaccccctacacctgcgtcaacaccccacagccagatgccccctatg
cccggtgtgcggagcagcgtgaacgttcaagacccatttgctgatggtggtgaccctgcc
tttgctagacggaactcaatgacaccgaactccaacttccagcccggaatggggggcccg
cctgatatgatggggcgcttgggtccgtacgagcctaataaggacccttttagtggtatg
aggaaagctggtgagcagttcatgcagaatccaggccccaccagtggaatgagtgagcaa
tatagccgaggccctccaggacctatgggtaacatgcagttaggtcacaggcaacagtat
ggaccatatggaccagggtatgaccggagacaagatccaggcatgagtccagatggtagt
atagctcctggagcttcacagccaaacaccatgccttctggtgcagacacggggatgtat
tcgcctaatccacagcagcaaaggcatgattcctatgttaatcagtaccctagccaaaat
gcacctcctagtggacaatacccaagtcagcagcctggactgtacccacagcagccgaat
tacatacaaaagaggcctggagatggtggttatggtcccccggcaaagcgccatgaaggg
gaaatgtatccattcagtggccagcagcaacaggcccctcaagcctcaagtggaccccaa
tcccaaccccaacaagaaatgtacaaccagtataatgcctacccaggcacagatcgacgt
ccacctggtccacaaagtcagttcccttttggttttggacgggacaggggacctaacgct
ggaggctctaactctcagtcctctatgccaccgcagatgatgggcagtcccttgccgtct
gtccctgatgggccccaaggtcccatgtggcaaggaagaaatgatatgacctatcctaac
tatcccaatcgtcagggtcctcctgcagttcccactcaaggtccagggtaccatgccatg
aatcgttctgaagacatgttaccttcagaccagcgaatcaatcatgaaggtccatggccg
ggtcatgtaaaccagagacagcctccttatggacctggtagttctggcccacccatgtct
agaccactacagtccaattttcaggcttctcaaaatcatattccacaggtatcaagtcca
gcacccatgccaagaagcatggggaacagtacgtctcccagcaagtccccttatatgcaa
actgggataaagattcagaaacctggatctgtagtcccagcgtcaaacatagccccacca
ccagtacagcctcccatgatgaggagagatgtagcctttcctccagggtccgtggaggcg
acccagcccatcctcaaaccacgtcgccgacttacgacaaaggatattggaacaccagaa
gcgtggagagtcatgatgtccctcaaatcaggattgctggcagagagcacttgggccttg
gacaccatcagtatacttctttatgatgataatagcatttccaccttcagtctttgtcag
cttcctggcttcctcgaactcgttgtggagtactttcgtaaatgcatcattgaaattttt
ggcatcttaaaagaatatgaggtcggagatccagggcagcgaacgctgattgacccagat
gctccagacaatgatatgtctgatgatgaaatcccagatggatggcagatggatgaggaa
gaggtcaaagaggacaaaatttgccaacacatgccacagatccaaatcaagcatgagaag
gatgatcatattcatgaccaaaaatccagtgaaaagtctgaagaagtgaagtttctggaa
atttcttcatctaaagcccgtgagataactactttcttacaggacagtagtgcggaacaa
gataagcttaaacaggcaagcaaatttgacaagcttcctattaaggtagtgtggaagaaa
gatccatttgtcattggtcggaccggcaaattgggccggcgacagacttttgacagtgga
ctgattcactggagtgttggtggaggcgacaccacggaacatatccaaactcgcttcgag
agcaagatggagctgcttaaacctcataaaccggtgcctgtaaatacagtggacctggtt
actgaaaagcgaaacaaaaataaaagaagcaaaccagaactgcaaaataagcaacagttg
gagtctcagccttcctcaggccaagcattggagaaagagaacagcttagatgttgccagt
gcatctgctaccactatggacactgcagaagaatctgtaaggaatggccgggagaaaaag
gaggagaccaacaaagataagttcctgtttggaattgacccatcacagaacagcaacatt
aaaatccttgaggatgagccacatagcaaggatgagtccccattgtgcacgttgtcagac
tggcaggatgcactagctcgccgctgcatatgtgtttccaacattgtccgcagtctctcc
ttcatccctggcaacgactgtgaaatgtccaaacacccaggcctgctgcttttactgggc
cgtgtggtgctcctgcaccaccggcatcccgagcgcaaagaggctcctgtcacttatgag
aaagaggacgaggaggatgaaggagtcagctgtgagcaagatgaatggtggtgggactgt
ctggaggttctgcgtgaaaactgtctggtcacgttagctaacatctcgggccagctggac
ctgtccatgtaccctgagagtatctgcctgccactgctggatggtcttcttcactgggct
gtctgcccctcagcagaagccatggatcccttccctacactgggccttaatggatcggtt
tcccctcagagaatggttcttgagacccttagcaagctcagcatccaagacaataatgtt
gacctcattctggcaacaccacccttcagtcgcctggagaaattctacagttcactggta
cgcttaattggtgaccgcaagatccctgtatgccgggagatggcagttgtgctgttagcc
aacctggcccagggtgacagccaggcagctcgggccatcgccgtgcagaaaggcagtata
gggaatctcctggggtttctggaggacagtctagcagccacacaattccaacaaagccag
tcttcactgttacatatgcagggaccccacattgaacccactagtgtggacatgatgcag
cgggctgcccgtgccctgcatgccctcgccaaagtagaggagaaccgctccgagtttatg
ttgtacgagtcacgactactggatgtctctgtatccccccttctgaactcaggagtgtcc
cacgtcatctgtgatgtactgtttctaattggccagtcatga

DBGET integrated database retrieval system