Clarias gariepinus (North African catfish): 128515729
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Entry
128515729 CDS
T10780
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128515729 (nup85)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128515729 (nup85)
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SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128515729
NCBI-ProteinID:
XP_053345861
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Position
28:4198173..4218312
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AA seq
650 aa
AA seq
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MEELDVEPTTTPIPGAGIKQKHLGFEWGPGDLLVYETNLKLQGPGSGCSGCPFVHVVRRD
EDIYSPILRKLFNESHHIFVGLQNIRDDLPSKNKKPQFVSISKNYRSVIRACMEELQQVA
VSTKDTQYSNQVSILLAIELIWNLCEVLFIDAAPAGSLLLYLLDWVRLHKADVDEKAREV
LQSESPTYHHAYWDVVMSFVLQGRMDEARQVLQKQASLQPASRAVYQLMDNLLHKMPVFN
PGSTQTLTEFDVKWRHWHEECDRCLQDNSFASNRHLETICKVLVGDEDTLLEQKELLGTW
YHLLISRLLFSHPTVKPAELHYYAQSSMDMFLESHSAPEPLDSILLAAFEFDLHQVIKDC
SIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLVLEYASGLFSHHSLWQLAVDYF
DHCPEFGRVYLELQIERVPLETERKALKVLRICEQRQMNEQVRSICKIMAKRALTNNRLG
SALSWSIRAKDAAFATLISERFLQDYCTRGSFSDLDLIDNLGPAMLLSDRLTFLGKYCEF
HRLYGEKKFHEAAKLLLSLMTAKIAPRSFWMTLLIDALPLLEQKEGIFSVDQTYELMFCL
EELTSDKSKLEPEQLAQDDDDVESTKLELLRLALARNLATAIVKEGTFET
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattagatgtggagcccacaaccacgccgatcccaggagcaggcattaaacag
aagcatctgggttttgaatggggtccaggagacctgctggtgtacgagaccaacttaaaa
ttacaaggtcctggttctggatgctccggttgcccgttcgtccatgtggtgcgcagagac
gaggacatctactcgcccatcctgcgcaaactcttcaacgagtctcatcacatcttcgtc
gggctgcagaacatcagagacgacctgccgagcaagaacaagaaacctcagtttgtgagc
atcagtaagaactacaggtctgtaatacgagcctgcatggaggaactgcagcaggtcgca
gtatcgacaaaagacacacagtacagcaaccaggtgtccattctcttagcgattgaactg
atctggaatctgtgtgaggttcttttcatcgacgcagcaccagccggctctctgctgctg
tacctgctggactgggtgcgtttacacaaagctgatgtagatgaaaaagcacgcgaggtc
ctgcagagtgaaagtcccacatatcatcacgcttactgggacgtggtgatgagttttgtc
ctgcagggtcgtatggacgaggcacgacaggttttacagaaacaggcgtctctacagccg
gcgtccagagcagtgtatcagctcatggacaacctgctgcacaaaatgcctgtgtttaac
cctggtagcacgcagaccctcacagagtttgatgtgaaatggaggcactggcacgaggag
tgtgaccgctgtctccaggacaactctttcgctagcaaccgtcacctggagaccatctgc
aaggtcctggttggtgatgaagacactctgctggagcagaaagagctgctgggaacctgg
taccatttactgatcagccgtctgctgttctcacatcctactgttaaacctgctgagctg
cactactacgctcagtcaagtatggacatgttcctggagtcgcacagcgctccagagcct
ctggacagcatcttactggctgcatttgagttcgatcttcaccaagttattaaagactgc
agcattgccctgaataactggtggtttgtggctcacctgactgacctgctggatcactgc
aaactcctgcagtcacacaacctccattttggctctaacctgcgggagttcctggtgctg
gagtacgcctctggactcttctctcatcacagtctctggcagctggcagtggattatttt
gatcactgccccgagttcggccgtgtgtatttggagctgcagattgagagagtgccactg
gagacggagcgcaaagcactgaaggtgctcaggatctgtgaacagcgacagatgaatgag
caagtacgcagtatctgtaagatcatggctaaaagggctctcactaataacagactgggt
tcagcgttgtcctggagtatcagagctaaagatgcagcctttgccacgctcatatctgag
aggtttctgcaggattactgcacacgaggctcgttctctgatctggatctgatcgataac
cttggacctgccatgctcctcagcgacagactcacatttcttgggaagtactgcgagttc
caccggctctacggagagaagaagttccatgaggcagcaaagctcctgctctccctcatg
acggccaagatcgctcctcgcagcttctggatgactctgcttatagacgccctgccctta
ctggagcaaaaagaggggatcttttcagtagatcagacgtatgaactcatgttctgtctg
gaagagctgacttctgacaaaagcaagctagaacccgagcagctagcgcaggatgatgat
gatgtcgagtccacaaagctggagctgctgcgattggctctggcgcgtaacctggcaacg
gccattgtgaaggagggaacattcgagacctaa
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