Clarias gariepinus (North African catfish): 128515785
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Entry
128515785 CDS
T10780
Symbol
vamp1a
Name
(RefSeq) vesicle associated membrane protein 1a
KO
K13504
vesicle-associated membrane protein 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128515785 (vamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128515785 (vamp1a)
Membrane trafficking [BR:
cgar04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
128515785 (vamp1a)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
128515785 (vamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Orf78
MtrB
MCU
Motif
Other DBs
NCBI-GeneID:
128515785
NCBI-ProteinID:
XP_053345930
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All DBs
Position
28:complement(16395299..16400684)
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AA seq
121 aa
AA seq
DB search
MSAPDQDVTADPGAPDREGGPAAPAAQPPNTSSNLRLQHTQAQVDEVVDIIRVNLDTIMD
RDKNLSNLDDRADALHSGAKMFESSAAKLKNKYWWKNCKMMIIMGVIVVLLICVAIVYFY
H
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccccagatcaagatgtcacagctgacccaggagccccagacagggagggagga
ccagcagccccagcagcccagcccccaaacaccagcagcaaccttcgtctccaacacaca
caggctcaagtggatgaggtggtggatatcatacgtgtaaatttggacactatcatggac
cgggacaagaatctgtcgaacctggacgaccgggctgatgcattgcacagtggagctaag
atgtttgagagcagtgctgccaagctgaaaaacaagtactggtggaaaaactgtaagatg
atgatcatcatgggagttattgtggtcctcctgatttgtgttgctattgtgtacttctac
cactga
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