Clarias gariepinus (North African catfish): 128515801
Help
Entry
128515801 CDS
T10780
Symbol
si:ch211-106h11.1
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128515801 (si:ch211-106h11.1)
Ion channels [BR:
cgar04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
128515801 (si:ch211-106h11.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_R13L1-DRL21
LRR_LRWD1
LRR_EndoS
LRR_9
Motif
Other DBs
NCBI-GeneID:
128515801
NCBI-ProteinID:
XP_053345962
LinkDB
All DBs
Position
28:5499793..5505714
Genome browser
AA seq
874 aa
AA seq
DB search
MFTLSELWSVTEGQGHYKLLKPWWEVFMDYLVLLMLMVSILAGTLLLSRDGVVCVPIHST
SNNSTASSLEVPLDPVTPQISSSVPISRSLAKGIQTNLDYQQYVYVSTVCYHEALPWFSR
FLPYVTLLQSLLLLASGSFWFHFPLTSSRIEHFLTILAKCCESPWTSRALSHAAKLDRAH
HSHHSDEDKLTRIQVPHIPKLFTRQSSLDSGTDSPLLARMGSTSVQPSPSPSNLSNCSTL
SSLSIVEPVSGTVLPESSSTGPTLDRSDGEQARALFERVRRFRAHCESSNIVYKVYTAQT
VFKVLKFIVIVSYTTPLLGSISFTYICQPHSYALTGYQTFQCTHLLSSVLRKLMKAYICL
MGLYGLLGIYTLFWIFHKSLRQYSFQHLHEIGSMLDAPDLCNDLAFLLHMTDQYDPLLAQ
RLSVFLSPVSETRLMEENLERRWNATRLRSMITSDQKGRSVLQLVAVPHLPPALFTFNQL
EVLKLELIGDAKLTAQISNMTALRELHLYHCSATVESGALMVLQERLESLHLTFTQAAEI
PGWVYSLRSLQELYLSGRVASEGTIGRGWALGSLRYLRHLRLLSLHGTLQRIPSELSEVA
GTLVHLEIHNEGARLLVLTGLRRLAGLTELELQGCQLERLPSALLSLTALRSLDLQHNSL
RTLEELLGLQHLRRLSCLRLAHNRILAVPTSVGVLRALELLDLAHNELRSLPPALFTIHR
LRRLLLAGNLLEELPAEVGALTLLTELDLSSNRLERLPEALFVNCKELRILNLANNSIGS
LNTGLGSLRHLSKLDIQGNNLEELPVELGCCSGLRGGGLLVETWLLHTLPCHITDFLQQP
SCASSEADSRPCSDIFPAFSAAQWSFVSSLESRI
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgttcacactctcagagctctggtctgttactgaggggcagggtcattataagcttttg
aagccatggtgggaggtcttcatggactacctggttctcctcatgctcatggtgtccatc
ctggctgggactctgctactttcacgagacggggtggtgtgtgtccccatacactccacc
tcaaacaactccactgcttcttccttggaagttcccttggatcccgtcacacctcaaatt
tcatcaagtgttcccatatccaggagtctggctaaaggcattcagaccaatctcgactac
cagcagtatgtctatgtgagcactgtgtgctaccatgaagctctcccatggttctcgcgc
ttcctgccctatgtcactttactgcaatcattgctcctgctagctagtggttccttctgg
ttccatttcccgcttacttcttcccgcattgagcactttttaaccatccttgccaagtgc
tgtgagtcgccctggacctccagggcactctcccatgctgccaagctggacagagcacat
cacagtcaccattcagatgaggacaagctcacaaggattcaagtgccacacatccctaag
ctctttactcgacaatccagccttgactcaggaactgacagcccccttctggctaggatg
ggtagtacatctgtccagccatctccatctccatccaatttgtctaactgctccacattg
tcctctctctcaatcgtagaacctgtttcaggtactgttcttccagaaagttctagcact
ggccccactctggacaggagcgacggagaacaggccagagccctgtttgagagagtccgc
aggtttcgggcacactgcgagagctctaatatcgtttataaggtttacacagctcaaacc
gttttcaaagtgctgaagtttattgtgattgtgagctacaccacacctttgttgggctcc
atctcttttacctacatctgccagccccattcttatgctttaacaggataccagaccttc
cagtgcacccacctgctatcatctgtcttgcgcaagctgatgaaggcctacatctgtctt
atggggctttatggccttctgggcatctacacccttttctggattttccacaagtctctg
agacaatactctttccagcatctgcatgaaattggttccatgttggatgctccagacctg
tgcaatgacttggccttcttgttacacatgacggatcagtatgaccccctgctggcccag
cgtctctcggttttcctgtctcctgtcagtgagactcggctcatggaggagaacttggag
cgtcgctggaatgccactcgtctgcgctcaatgataacctccgatcaaaaagggcgctct
gtactgcaactcgtggctgttccacatctacctcctgcacttttcacttttaaccagttg
gaagtgctaaagctggagttaattggagatgctaagttaacagcacagatctccaatatg
actgccttaagggagcttcatttgtaccactgctcagccacagtggagtctggtgctctt
atggtccttcaggagcgtctagagtctctacacctcaccttcacccaagctgcagagatc
cctggatgggtgtactcattgcgcagcctgcaggagctttatctgagtggacgggtggcc
agtgagggcactatcggtcgtggctgggcgctgggcagcctacgctatttgcggcacctt
cggctcctttcattgcatggcacgctccaaagaatcccatcagagctgagcgaggttgct
ggcaccttggtgcatttagagatccacaacgaaggtgccaggctattggtgctaacagga
ctgcgacggctggcagggttgactgaactggaactgcagggatgccagcttgagagattg
ccttcagctttgctgtcactaacagcattacgcagtttagacctgcagcataacagcctg
agaacattggaggagctgctgggactgcagcatctaaggcgtctttcctgcctaagactg
gcccacaatcgcatacttgctgttcctacaagtgtgggagttctccgggccttggagctc
ctggatttggcacacaatgagttgcggagtcttccaccagcacttttcacaatccatcga
ctcagacgtctcctactggctgggaacctgcttgaggaactgcctgcggaagtgggggca
ctgactcttctcacagagcttgacctgagttcgaacaggcttgaaagacttccagaggca
ctttttgttaactgcaaggagttgcgcattctaaatttggccaataattccataggatcc
ctgaacacgggactgggatctttgaggcacctttccaagttggacatccaaggaaacaat
cttgaggaactgccggttgagcttggatgctgctcagggcttcgtgggggtggtttactg
gtggagacctggctgctccacactttgccatgtcacatcacggacttcctccagcagcca
tcttgtgcttcttcagaagctgattcccgcccttgttcggatatattccctgccttctca
gctgctcagtggagctttgtctcctctttggaatcacgcatatag
DBGET
integrated database retrieval system
