Clarias gariepinus (North African catfish): 128515839
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Entry
128515839 CDS
T10780
Symbol
cnot3b
Name
(RefSeq) CCR4-NOT transcription complex subunit 3b isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128515839 (cnot3b)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128515839 (cnot3b)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128515839
NCBI-ProteinID:
XP_053346027
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Position
28:16625012..16656607
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AA seq
909 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVDNRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPVQKE
KEEVGQWLTTTIYTLNMQVEQFESEVESLSVQTRKKKGDKEKQDRIDELKKLIERHRYHI
RMLETILRMLDNDSVQVDSIRKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDISTPLVA
TSPPAHAEDEIFQHSSSTPTSTTSSSPIPPSPATCTTNSEDDKKRGRSTDSEFGQSPVKN
GNPSCLSSSSSSSCSGSSSASVVSVATMASSSSSSGGGAGGGAGSLLSNMAGHVQNSCSY
SSAIQQQMQHGQQQHQPKNAINSQSNSSVPPAPSSILLPNPTLATSPTSISAPSNQPQSP
LTPNSASSLSHALTIGLGKSSAPTPSSVGQIPGLGLSGMPASRNSLPGPLQVSTPAPYAQ
AAASGTVNASVTNSGGVPSAGTNGNGASTGLLGSAPGTTGIISSAVLGLGTTQTAGQPPS
SLVAPSPIGGGLVQTSSVGVIGSNIVNATSGSAAAVGGTGLPRPPSGQKQNGGTTYSAIV
ADSSSDSTLSSASQLQNNQASTLNTTISLPKDTGSSLLGSITLPTSSPSPPYSESKPSGG
SLLNGPLSYTQAADAIKPQEPLSSLKSLAETAAQGSGLEGELTALHLTGGSKVVDWNTGV
CNGSDIFPSSTAPSGPPTAPQSSLSEVNIPPSLGVCPLGSIPISKEQHYQHVMQEAAWTH
MPHPSDSERIRQYLMRNPCPTLPFHHQMPPPHSDSVEFYQRLSTETLFFIFYYLEGTKAQ
YLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEY
RYLEDRDLQ
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaacgaaaactacaaggtgaaatcgatcgatgtctaaaaaaagttgcagaa
ggagtcgaacagtttgaggacatctggcaaaagcttcacaatgcagcaaacgccaaccaa
aaagagaaatatgaggctgacctcaagaaagagataaagaaattacagcgcctccgagac
cagattaagacgtgggtggcctcgaacgagatcaaagacaaaaggcagctagtggacaac
cgcaaactcatagagacacaaatggagcgctttaaaatcgtagagcgagagacaaaaacg
aaagcatactccaaagagggactcgggcttgctcagaaagtagaccccgtgcagaaagag
aaagaggaggtcggacagtggctcacgacgacaatatacacgttaaacatgcaggtggaa
cagtttgaaagcgaggtggaatcactatcggtccagacacggaaaaagaaaggagacaaa
gagaaacaggatcgaatagatgagctgaaaaagttgatcgagagacaccgctatcacatt
cgaatgctggagaccatcttgcgaatgctggacaacgactcggtacaggtggactccatc
cgtaagatcaaggacgacgtcgagtactacatcgattcatctcaagatcctgatttcgag
gagaatgagttcctctatgatgaccttgacctggaggatatatccacgccattggttgcc
acatctcctccagctcatgcggaggatgaaatcttccagcactccagttccacaccgaca
tccaccacgtcgtcttccccgatcccgccatctccggctacttgcactacgaattccgag
gatgataagaagcgaggtcgttccacagacagtgaattcggtcagtctccagtgaagaat
ggcaatccgtcatgcctttcatcctcatcgtcctcttcatgttcgggatcctcctctgcg
tcagtggtgtccgtggcgaccatggcaagcagcagcagctcgtctggtggcggcgccggt
ggcggcgccggtagcctcctgagcaacatggcaggccacgtgcaaaactcgtgcagctac
agctctgccattcagcagcaaatgcagcacggccaacagcagcaccaacccaaaaatgcc
atcaattcccagtccaactcctctgttcctccagctccttccagtatcctcttacccaac
ccaacattagccacttctcctaccagtatcagtgcaccaagcaaccagccccagtctcca
ctcactcctaactcggcttccagcctgagccacgctctcactataggcttaggcaaaagt
agtgcaccaacgcccagtagcgtcggccagattcccggccttggtctctcagggatgccg
gcatccaggaacagtctcccagggccgctgcaagtttccaccccggcgccgtatgcccag
gccgccgcatctggcaccgtcaacgccagcgtcacaaactccggtggagttccatcagct
ggcacaaatggaaacggtgcctcaacaggtctccttgggtcggcacctggcaccacaggc
ataataagcagcgcggtcttgggtctggggactactcaaactgcaggccagccgccgtcg
tccttggtggcgcccagccctattggaggaggactggtgcagacgagcagcgtgggcgtc
atcgggagcaacatcgtgaacgcaacatcaggaagtgcagccgccgtaggaggcacaggg
cttccacgcccacctagtgggcagaaacagaacggtggcacaacctacagtgccatagta
gcagatagttcttctgattctaccctcagcagtgccagccagttacaaaacaaccaagcc
tcaaccttaaataccacaatcagtctgcctaaggacaccggttccagccttctggggtct
ataactcttcctaccagttcaccatcgcccccgtatagtgagagtaaaccaagtgggggc
agcctgttgaatggacctctttcctacacacaagcagccgacgccatcaagcctcaggaa
ccgctcagttctctgaaatcgttggcagagaccgcagctcagggctcaggtttagaagga
gaactcactgcgctacatctcactggaggaagcaaagttgtagattggaatacaggagtg
tgcaatggttcagatattttccctagttccacagccccatcaggtcctcctacagcccct
cagtcttccctttcagaggttaacattcctccatcactgggcgtctgtcctctgggttct
atccccatctccaaagagcagcactaccagcacgttatgcaagaggcagcatggacacac
atgccccacccgtcagactcagagaggatcaggcagtacctgatgaggaatccctgtcct
acattgccttttcatcaccagatgccaccacctcactcggactctgtggagttctaccag
agactgtccacagagacactcttcttcattttctactaccttgagggcacaaaggctcag
tatttggcagccaaagcattgaaaaagcagtcctggaggttccacaccaagtacatgatg
tggttccagaggcacgaggagcccaagaccatcaccgatgagtttgagcaggggacgtac
atttacttcgactatgagaaatggggccagaggaagaaagaaggtttcacgttcgagtac
aggtatctcgaggaccgggacctccagtga
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