Clarias gariepinus (North African catfish): 128515868
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Entry
128515868 CDS
T10780
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128515868 (irx1b)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
128515868 (irx1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Nucleo_P87
Motif
Other DBs
NCBI-GeneID:
128515868
NCBI-ProteinID:
XP_053346078
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Position
28:complement(9773366..9777116)
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AA seq
412 aa
AA seq
DB search
MSFPQLGFPQVYGVERASPPRDGGSESGAGVTGSPVSSAAALAPLLGVYAHPWSAHRYGA
FMPYSSAEAALLSHMGSQYELKENPGAHPAGFAVHTAPGFYPYGQYQYGDPARAKSATRE
TTSTLKAWLQEHKKNPYPTKGEKIMLAIVTKMTLTQVSTWFANARRRLKKENKVTWGRSA
EDGYDSDRDDEDDESAHKQHEREEEIDLETVDTDDERAEARKEPGEAKAHEQSESESEGA
DAGALNSPGVPVAGGKDACAGKSGSGDVSPGCQRPVNSNKPKIWSLAETATSPDNCQKAS
TAVTAHPAFLSTNGIYTCQIGKLNSWTGGALLGAGPLIGVRSLMGVSPSSHYITSSAQSE
SPTRSLSPQHNTDREHVQRTESPALPSQRPQFPVIHDRSHHETAQRALKTVS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctgggcttcccgcaggtgtacggagtagagagagcgtctccgccg
cgggatggcggctcagagagcggcgccggtgtcaccgggagtccggtgagctccgcggct
gccctcgcgccgctactcggcgtgtacgcacatccgtggagcgcgcaccggtacggagcc
ttcatgccgtacagcagcgccgaggcggctcttctcagccacatgggctcccagtacgag
ctgaaggagaaccccggtgctcacccagccggcttcgcggtgcacacggcccccggtttc
tacccgtacgggcagtaccagtacggagaccccgcgcgggccaagagcgcaacacgcgag
accacgagcacgctgaaagcctggctgcaggagcacaagaaaaacccgtatcccacgaaa
ggcgagaagatcatgctggccatcgtgaccaaaatgaccctgacgcaggtgagcacgtgg
ttcgccaacgcgcgccgacgcctcaaaaaggagaacaaggtgacgtgggggcgcagcgcc
gaggacggctacgacagcgaccgcgacgacgaagacgacgagagcgcgcacaagcagcac
gagcgcgaggaggagatcgacctggagaccgtggacaccgacgacgagcgcgcagaggcg
cgcaaagagccgggcgaggccaaggcgcacgagcagagcgaatcggagagcgagggcgca
gacgcgggcgcgctgaacagcccgggcgtccccgtggccggcgggaaagacgcgtgtgcg
gggaaaagcggctcgggcgacgtttctccgggatgccagagacctgtgaactcaaacaaa
cccaaaatctggtcgctcgcggaaactgcgacgagtcctgataactgtcagaaagcgagc
acggcggtcaccgcgcacccggcgtttttatccactaacgggatttacacgtgtcagatc
gggaagctgaacagctggactggaggcgctttgctcggtgcaggacctctaatcggtgtg
cgctctttaatgggagtgagtccgagcagccattacataacctcaagcgctcagagtgag
agtcctacacgcagtctcagcccacagcacaacaccgatcgagaacatgttcagagaact
gaatctccagcacttccttctcagagaccacaatttccagtcattcatgacaggtctcac
catgaaacagcacagcgagcactgaagactgtttcctga
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