Clarias gariepinus (North African catfish): 128515892
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Entry
128515892 CDS
T10780
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128515892 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgar03021
]
128515892 (ctdp1)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
128515892 (ctdp1)
Protein phosphatases and associated proteins [BR:
cgar01009
]
HAD phosphatases
Fcp/Scp phosphatases
128515892 (ctdp1)
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128515892 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
BRCT
Biotin_lipoyl
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
128515892
NCBI-ProteinID:
XP_053346111
LinkDB
All DBs
Position
28:19437517..19460939
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AA seq
908 aa
AA seq
DB search
MEVTEIRLPAGARAVRLREWKVEPGAPVTVDSVVALCVAIPTDSEDQEQPHRGLAERKVK
SDRAGVVRELCYQLGEVISPGDVIARIEECSHPIVMKGLCAECGQDLTQLQNRNGKQQNP
ISTAMVSMVHSVPELMVSSEQAEQLGREDQKRLHRNRKLVLMVDLDQTLIHTTEQHCQNM
STKGIFHFQLGRGEPMLHTRLRPYCKEFLEKISKMYELHVFTFGSRLYAHTIAGFLDPEK
KLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYFK
GTGDINAPPGSREAQLAKKSTGNLASQPLQTTSVSLADEGRNNGHRKQDKDKKSLHDDAH
VPETQGASANPDGKRTEKSHLSNKSDIKVEELDGADGTRQSGTTEERETVTVADGGDSAK
VGSPRDKNDEPLETIKPKDTSVDEECSGREENGDGGVDADGVCDVDEESLGDNGCDKKET
ETESQNSEQSGVTMGEESLDHSMVDEEEEEEEEDTDKDDHLIYLQEILMRIHNEYYSRYE
AYLRGDFSETPDIRKIVPELKSSSLAGTNIVFSGLYPTNYPMERTRESYHAKALGAKVSK
NLVLSAKDPNSTTHLIAARAGTEKVRQAQACKHLHVVNPDWLWGCLERWERVEEQLFPLK
EDYTKSQRSSSPSPFPDVQEPFPAPVIDPVSIQPKGRPPPEVHTYDSVTGKLIRRGPQVQ
RPPQKSSATTSGHEVPFRDMRFLRQGDVDSSRPDDEQPAPSRRKRQPSLSETMPLYTLCK
EDLDSMDREVDDILGEESENDSEGKEKDEKVEGEEEDDASRQSAEPTDYQQTPGSSVKDT
TSTSKEDRSQTESIARGHKRKRQDTREEDDDMDGDMASQSSKESNEDGSSSEADEMAAAL
EAELNDFM
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgacggagatccggctgccggcgggagcgcgtgcggtgcggctgcgggagtgg
aaggtggagcccggggcgccggtgacggtggactccgtggtcgcgctctgcgtggcgata
cctaccgactcggaggaccaggagcagccgcacagggggttggcggagaggaaggtgaag
tctgaccgcgctggagtggtgagagagctgtgttaccagctcggagaggtcatatctccc
ggggatgttatagcaagaatagaggaatgcagccaccccatagtgatgaagggtctgtgt
gctgagtgcggtcaggacttaacacagctacagaacaggaacgggaagcagcagaacccc
atctcgacagcaatggtgtccatggtgcacagtgttcctgagctgatggtcagctcagag
caagcagagcagcttggccgagaagaccagaagaggctccacagaaacaggaagctggtt
ctcatggtggatctggaccagactctgatccacaccacagagcagcactgccagaacatg
tccaccaaaggaattttccatttccagttggggagaggggaacccatgctgcacacacgt
cttaggccttactgcaaagagtttctggagaagatttccaagatgtacgagctgcacgtg
ttcacgttcggaagtcgactctacgcacacaccattgcaggctttttggaccctgaaaag
aaacttttctcacacagaatcctgtctcgagatgagtgcatcgacccgttctccaagacc
ggaaacctcaggaacttgttcccttgtggcgactccatggtgtgcatcatcgacgacaga
gaggacgtgtggaagttcgcccctaacctcattacagtgaaaaaatacgtctacttcaag
gggacgggtgacatcaacgctccacccgggtcacgggaggctcagctggcgaaaaaaagc
acaggcaaccttgcgagtcaacctctgcagaccacatctgtatcattagcggatgagggg
aggaataacgggcatcggaaacaggacaaggataaaaagtctcttcatgatgacgctcat
gtgcctgaaactcaaggagcatcagctaatcctgatggaaagaggacagaaaagtcacat
ttgagtaacaaatccgacattaaagtagaagagttggatggcgcggacgggacgaggcag
tcaggtaccactgaggagcgagagactgtgactgtagccgatggcggtgactcggctaaa
gtgggatcgccccgtgacaaaaacgatgagcccttagaaaccataaaaccaaaagacaca
agcgtagatgaggagtgcagcggtagagaggagaacggagatggcggggtggacgcggac
ggcgtatgtgatgtggatgaagagagtttgggtgataacggatgtgacaagaaggaaacc
gagacggagtctcaaaacagcgagcagtcaggtgtcaccatgggcgaggagtctttggac
catagcatggtggatgaagaagaagaagaggaggaggaagacacggacaaggacgatcat
ttaatttaccttcaggagatcttgatgcgcattcacaacgagtattactcgcgctacgag
gcttacctccggggggacttctccgagacgccagacattcgtaagatcgtccctgagctg
aagagcagctctctcgcaggcaccaacatcgtgttcagtggcctgtaccccacaaactac
cccatggagcgaactcgagagagctaccatgcaaaagctttgggggccaaagttagcaag
aacctcgtgctcagtgccaaagatcccaacagcaccacccacttaatcgctgcacgcgca
ggtacggagaaggtccggcaggcccaggcctgtaaacacctgcacgtggtgaatccggat
tggctttggggttgcttggagcgatgggaaagagtggaggagcagctgttcccgctcaag
gaggactacaccaaatcacagagaagtagtagcccatcaccatttcctgatgttcaagag
cccttccctgcgcctgttatcgaccctgtttccatccagcccaaaggccgaccgcctcca
gaggttcacacgtatgattctgtaactgggaagttgatccgaagaggccctcaggtacaa
cgtcctcctcaaaaatcatctgcgacaacatctggacatgaagtaccctttagggatatg
agatttctgcggcagggagatgtcgacagctcaagaccagatgatgagcagccggcgccg
tcacgcagaaaacgccagccaagcctgtctgaaaccatgcctctctacacgctctgtaaa
gaggacctggacagtatggacagagaggtggatgatattcttggagaagaaagtgaaaac
gatagtgagggaaaagagaaggacgagaaagtggagggcgaggaggaagacgatgccagc
cgtcagagtgctgaaccaacagattaccaacagaccccgggctcttctgtcaaagacacg
acatcgacatctaaagaagatcgcagtcagactgagagcatagcaagaggtcacaagagg
aaacggcaagacacaagagaggaggacgatgacatggatggagacatggctagccagtca
agtaaagagtcaaacgaagacggtagtagctcagaagcagatgagatggctgctgccctg
gaggcagagttaaacgacttcatgtga
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