Clarias gariepinus (North African catfish): 128515901
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Entry
128515901 CDS
T10780
Symbol
sox4a
Name
(RefSeq) transcription factor SOX-4a
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128515901 (sox4a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128515901 (sox4a)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128515901
NCBI-ProteinID:
XP_053346121
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Position
28:complement(10119600..10121051)
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AA seq
332 aa
AA seq
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MVMVANNPDLPPIDCADSGEMEADADASRTPGSPHATGDVAWCKTPTGHIKRPMNAFMVW
SQIERRKIMEQSPDMHNAEISKRLGKRWKLLRDCDKIPFIREAERLRLKHMADYPDYKYR
PRKKVKTSAGACKAGGEKADKGVSAGGKSSSKKSHGSNKSPGRTHKKSGSLESVGDALYK
PRAASSAKQIPDKPAKRGSESLAPSAAVPASPTLSSSAECAEPASLYDDAGTRFKHARAS
SPTPSASHSSSSSSSHSSDEEFEDDPLDFDPSPGGFSGGFGSDTCLDRDLDFGFESGSGS
HFEFPDYCTPEVSEMISGDWLESTISNLVFTY
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggttatggtggcgaacaacccagacctgccgcctatcgactgtgccgactccggtgag
atggaggcggacgcggacgcatcgcgcaccccgggctccccgcacgccaccggggacgtg
gcgtggtgcaagacgcccaccggccacatcaagcggcctatgaacgctttcatggtgtgg
tcacagatcgagcggcgcaagatcatggagcagtctcctgacatgcacaacgcggagatc
tccaagcggctggggaagcgctggaagctcctgcgagactgcgacaagatcccgttcatc
cgcgaggccgagcgcctcagactcaaacacatggcagactatccggactacaagtatcgg
ccgaggaagaaggtcaaaacgtctgctggtgcatgcaaagctggcggcgagaaagcagac
aagggggtcagcgctggcgggaaatcgtcatccaaaaaaagccacggctctaataaatct
cctggtaggacgcacaagaagtctggctctctcgaaagcgtcggtgacgcgctctacaag
ccgagggcagcgtcttctgcaaagcagatcccggacaagcccgcgaagcgcggctcggaa
agcctcgccccctccgccgccgtgcccgcgagcccgaccctgagcagctcggcggagtgc
gcggagcccgcgagcctctacgatgacgcggggacgcgcttcaaacacgcccgcgcctca
tcgccgaccccgtccgcctcgcactcctcctcttcctcctcctcacactcctccgacgaa
gagtttgaagacgacccgctggacttcgaccccagtcccggtggctttagcggcggattc
ggtagcgacacgtgcctggaccgggacttggacttcggctttgagtcgggctccggctcg
cacttcgagttcccggactactgcacacccgaggtgagcgagatgatctcgggggactgg
ctcgagtccaccatttctaacctggtgttcacgtattga
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