Clarias gariepinus (North African catfish): 128516030
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Entry
128516030 CDS
T10780
Name
(RefSeq) cysteine protease atg4da-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04136
Autophagy - other
cgar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128516030
04136 Autophagy - other
128516030
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgar01002
]
128516030
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128516030
03029 Mitochondrial biogenesis [BR:
cgar03029
]
128516030
Peptidases and inhibitors [BR:
cgar01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
128516030
Membrane trafficking [BR:
cgar04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
128516030
Mitochondrial biogenesis [BR:
cgar03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128516030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Peptidase_C78
Motif
Other DBs
NCBI-GeneID:
128516030
NCBI-ProteinID:
XP_053346298
LinkDB
All DBs
Position
28:complement(5121680..5133906)
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AA seq
484 aa
AA seq
DB search
MRIYSRFSDCHGEQFQQRNMMTSVTSDEVNSTEDLESFEFVPHPGPSNYPHSSELTNSSE
AVKDKPRLKSRLVSAWNSVKYGGWTLKTKPRLSKNSSVCMLGHTYHLGHEDERQLFRCVF
SSLFWMTYRRGFSSLHGSSLTSDSGWGCTLRSAQMLLAQALVLHTMPSDWIWPGTQQKTR
DDLELRTSRPLVLGLGRSQKGGQRRRSEGAILDEVEHGQEIGHRRLVAWFGDTPSAPFGL
HRLVELGQSSGQRAGDWYGPSVAAHMLRKAVESSEVSDLAVYVAQDCTVYVTDVMRVCKK
HQDELMVRFRSVIILVPVRLGGDTLNPAYIPYVKRLLQLKCCVGIIGGKPKHSLYFVGFQ
ADDQLLYLDPHFCQAAVDVSQPNFPLESFHCKTARKLPFHRMDPSCTLGFYAKSKRDFDT
LRSEVTTTLTSSTDTYPIFTFVEGSGQDQHEQLELTFDPGVPVLPRDQGRRRSKRSSMDE
FVLL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatatattcacggttctcagattgccatggtgaacagttccagcaacgcaacatg
atgacctctgtgacctctgatgaagttaactccacagaagacctggagtcatttgaattt
gtgcctcaccccggaccctcgaactacccacactcatcagagctcacaaactcctcagag
gcagtgaaggacaaacccaggctgaagagcagacttgtgtcagcatggaacagtgtgaag
tacggaggctggactctgaaaactaaacctcgtctgagtaaaaactcttctgtgtgtatg
ctgggtcacacataccaccttggtcatgaagatgagaggcagctgttccggtgtgtgttc
tcgtctctgttctggatgacctacaggagaggcttctcctcattgcacggatcatctctg
acctcagacagtggatggggctgcacgttacgctctgcccagatgctgcttgcacaagca
ctagtgctacacacgatgccttcagactggatatggcctggaactcagcaaaagaccaga
gacgacttggagctcagaacctctcgaccccttgtgctgggtttgggacggagccagaag
gggggtcagaggaggcggagtgagggtgccatactggatgaggttgagcatgggcaggag
attggacaccgtcgtctggttgcgtggtttggggacacgccgtccgctccgtttggcctg
catcggctcgttgagttggggcagtcttcagggcaacgagcgggtgactggtacgggccc
tctgttgccgctcacatgctgcggaaggcagtagagtcatctgaagtcagtgacctggct
gtgtatgtcgctcaagactgcactgtgtatgtgaccgatgtgatgagggtatgcaagaaa
catcaggacgagcttatggtgagatttcgctccgtgattatcctggtgcctgtgagactg
ggcggagatacgcttaaccctgcgtatatcccatatgtgaagaggctgcttcagctgaag
tgctgtgtgggaataatcggaggaaagccgaagcactcactgtactttgttgggtttcag
gcagatgatcagctgctgtatttggatcctcatttctgtcaggctgctgtagatgtctct
cagcccaacttccccttagagtcgtttcactgtaagacggcgaggaagctgccgtttcac
cgcatggacccaagctgcactctgggattttatgctaagagcaagagggatttcgacacg
ctccgctccgaagtcaccacgactctgacctcatccacagacacgtatcccatcttcacc
ttcgtggagggcagtgggcaggaccagcatgaacagctggagttgacctttgacccagga
gtacctgtcctccccagagaccaaggaagacgaaggagtaagcggagcagcatggacgaa
tttgtgctgttgtaa
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integrated database retrieval system
