Clarias gariepinus (North African catfish): 128516100
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Entry
128516100 CDS
T10780
Name
(RefSeq) replication protein A 32 kDa subunit-like isoform X1
KO
K10739
replication factor A2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03030
DNA replication
cgar03420
Nucleotide excision repair
cgar03430
Mismatch repair
cgar03440
Homologous recombination
cgar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128516100
03420 Nucleotide excision repair
128516100
03430 Mismatch repair
128516100
03440 Homologous recombination
128516100
03460 Fanconi anemia pathway
128516100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgar03032
]
128516100
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128516100
DNA replication proteins [BR:
cgar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
128516100
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
128516100
MMR (mismatch excision repair)
128516100
DSBR (double strand breaks repair)
HR (homologous recombination)
128516100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
Motif
Other DBs
NCBI-GeneID:
128516100
NCBI-ProteinID:
XP_053346372
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Position
28:13966246..13971972
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AA seq
251 aa
AA seq
DB search
MGSQGYESSCSPGGFSSSRNERNTKTAGILRVMPCSVSQLLSATEHKDSFFIKDVELQQV
TVVGLIRSSKTTPTHLLYSLDDMTGPPLEVKQWLNLEEVNMNHSVIPPGTYVKVTGSLRT
IQHNRFMVAFNIRRLDDFNEITSHMLEVIQAHLHGASSSNSSRIRNGAMTSCIINTPHTS
DPATVGFTANQRQVFNLIKSCHLAEGITLQCLRNSLNYLSFYDISACLQFLINEGHIFST
IDDVHFKCTYG
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggggagccaaggttatgagtctagctgttctccaggtggattttcatcttcgagaaat
gaaagaaatacaaagactgcaggaatcctgcgtgtgatgccatgcagtgtgtctcagctc
ctgtctgctacagaacacaaagactccttctttataaaagacgtggagctccagcaggtg
actgtggtgggtttgatcagaagcagcaaaacgacgcctacacatcttctgtattctcta
gatgatatgactggccctcctctggaagtcaaacagtggctaaatcttgaggaagtcaac
atgaatcattctgttattcctcctgggacatatgttaaagtaactggaagtctccgcacc
attcagcacaacaggttcatggtagcgttcaacatccgccgtctggacgactttaatgag
atcacttcacacatgttggaggtgattcaggcccatctgcacggtgcaagcagctcgaat
agtagtaggataaggaacggggccatgacctcatgtataataaacacaccgcacacaagt
gacccagccaccgtcggttttacagccaatcagaggcaggtgtttaatttgattaaaagc
tgtcatttggctgagggcatcactctgcagtgcctgaggaattcgctcaattatctttcc
ttctatgacatcagcgcttgtctgcagtttcttataaacgaaggacacattttctctacg
attgatgacgtccatttcaagtgtacttacggctga
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integrated database retrieval system
