KEGG   Clarias gariepinus (North African catfish): 128516185
Entry
128516185         CDS       T10780                                 
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like
  KO
K18412  trinucleotide repeat-containing gene 6 protein
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
Messenger RNA biogenesis [BR:cgar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     128516185
Chromosome and associated proteins [BR:cgar03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    128516185
SSDB
Motif
Pfam: TNRC6-PABC_bdg RRM_occluded RRM_1
Other DBs
NCBI-GeneID: 128516185
NCBI-ProteinID: XP_053346473
LinkDB
Position
28:938327..956892
AA seq 1447 aa
MEDFKSQEEDQSNPVCHKDTTQILKESTTSASLNCVTLRSSSTPSLSPYPAPGGPTVSPA
GENNAKQTAVANGQVPPAASLWHMSREVPPRFRNHQEPKILLKRGQSLDGISPFLHTGDQ
SNANTTQPSASLSYANSTCGPDFEPPLLSQGMDKIVVDGSDLQEWPSIVDSTRQNEVLSK
AARESSQGMQKNKTGQVELGVTADGGNSESTLPSSCETSLNSTDVESVQQNTQSQWEDNR
VETVVGPKQAEADIADYGKGLTEAVQLSTFSSNLEALTPDLCQSRTGGELQETGEVWGTS
EENQVGRKVTGNNEVSNDVSTTVWDEERSGLNKPAAIVRQSDMPKEDMSEHVRESSTSCL
QDTQIITTNTTTLDNEKGINERKWEGSEYASADHGRTEDGTWSHSNSRAQAQGNEVSLQS
MISRRDLDPRVLCNTGWGQSPIKQGIAWDLEVDVHSESGQDWKAQIDQNRPTSPQWTRDV
PGHLKGGRIQGAVSKGEQINEKLDTKDGALLTGRGNSLTEAVEVEQAGGWCGNRRDGGQH
READRGSWGPGDTQWGGSKGKAGQGDKSWVDSEDDGWRSKQHQGWGNNHHSQHIPNTPKI
LKGPNQQQVQQSQSQLTQPRGSQESKDLPAGPVALNQSSGWKPGSIPHTSSAIEPSGWEE
PSPQSISRKMEIDDGTSAWGDPTHYENRSVNMWERSNVQHRGQPSQLKHESMPGPTPTSK
DKNTGWERSTNAPEQVMENSSAGWGKAFDAPSSWRDTEEPGKGTGWSRSRSNPPNTASKT
MQDGWGDEGLNTSRHSSWEEDDGGPGMWGNRSQENTSSFSSGGWNQGQSCRRTAAKGPLK
GNVGGPWTSSVTRQFSNMGITEEDAVSASDRSRRGMNDFNGDMRRGGRGGGSFRSHGFKE
PGTSGVFNTGGHLRGMQQPGVHHVNTSPGVRAQVPQQFLPPQVSGSVLNPMFPPQLSPQN
LAMLSGINPHMQQVQLAYQLLLQQQQQQHFLSQRKFPHPPPPLLPHQDPQQLARIMAVLQ
QRPKTPTSFPGFVPGVEPESLMGGVKEVGGAQPQFKWMMEAGHPLCPSPPDPIMIKNGLL
PGPMKLRGDSSFPHYDLVENVGVASPNLIDNWHRSPGAKLGSAPNTPTWPPEFQPGVPWK
GVQSPEPNPNPYSGILGENTLSDTEHHLLQDHTELNTTILPSPAAWPYCPSDTHNSAKFP
APPTSWPPDPIGHRTNRNSSQMPRPPPGLTHQKQSSWLGVGPHVPRGWSSESQESPFGTE
SSWSGGASTGSSWLLLSNLTPQINSSTLKTICLQHGPLMTFNLSLAQGSALIRYRSPEEA
AKAQSALHMCVLGNTSILAEFVSEEDVARYFTHSQSRETDGETDRETESETGGGGGGGVG
EVKLGWENLDGAGLSLFNQWSHAQEPGVWGGVAPGYHGNNLWGSPQVEDRGQGLLPGNLL
GGGADNL
NT seq 4344 nt   +upstreamnt  +downstreamnt
atggaagacttcaaaagtcaagaagaagatcagagtaatccggtttgtcacaaggacaca
acgcagatacttaaagaatcgaccacatctgcgtccttaaactgtgtgactctgcgcagt
agttccactccgtccttgtccccttatcctgctcctgggggccccacggtgtcccccgca
ggtgagaataatgcaaagcaaaccgctgtggcaaatggacaggtccctcccgcagcgtct
ctgtggcacatgtcccgggaagtgccacctcgtttccgtaaccatcaggagcctaagatt
ctgctgaagagaggacagtcactagatgggatttcaccattcctccacacaggggatcag
tcgaatgcaaacactacacaaccctcagcttctctatcttatgcaaattccacatgcggt
ccagatttcgaacccccgctgctgtctcagggaatggataagattgtagtggacggctcg
gacctgcaggaatggcccagtattgtggacagcaccaggcagaacgaggtcttgagcaaa
gctgcgagagaatccagtcaaggcatgcaaaagaacaagacagggcaggtggagcttggt
gtcactgcagacggaggcaactctgaatcaaccctgccttcctcttgtgaaacatccttg
aattctacagatgtagaaagtgtgcagcaaaatacccaaagccaatgggaggacaatagg
gtggagacagtagtgggaccaaaacaagcagaagctgatattgctgattacggcaaaggg
ttaactgaggcagtgcagctttctactttcagttcaaatctagaagccttaactcctgat
ttatgtcaaagtaggacaggtggagaactgcaggagactggagaagtgtgggggacctct
gaggaaaaccaggtaggaaggaaagtcactggaaacaatgaagtcagcaatgatgtatct
acaacagtctgggatgaagaaagaagtggtctaaataagccggcagctatagttcgacag
agtgacatgccaaaagaagacatgagtgaacatgtaagggaaagctccacaagttgttta
caggacactcaaattatcaccaccaatacaacaacactcgataatgagaaagggataaat
gaaaggaagtgggagggatcagagtatgcgtccgctgaccatggaagaaccgaagatggg
acttggtctcacagcaattccagagctcaagcccaaggcaatgaagtgtccttacagagt
atgattagtcgacgggacctggatcccagagtactttgtaacacaggctgggggcagtcc
ccgatcaagcagggcatcgcctgggatctggaggtggacgttcactctgaatcaggtcaa
gactggaaagctcagatcgatcaaaacagacccacctctcctcagtggaccagagacgtg
ccaggccatttaaagggaggcagaatccaaggggcagtgagtaaaggggagcaaattaat
gaaaaattagatactaaagatggtgctctactgacagggagaggcaacagcttgacagag
gctgttgaggttgaacaggcaggaggttggtgtgggaataggagagatggtgggcagcac
agagaagcagacaggggcagttggggcccaggagacactcagtggggtggaagcaagggt
aaagccggccaaggtgacaaatcatgggtcgactctgaggacgatggatggagaagcaaa
caacaccagggatggggcaacaaccatcactcccaacatattccaaacactccaaaaata
ctgaaaggcccaaatcagcaacaagtgcagcaatcccagtcccaacttactcagccaaga
ggttcacaggagtccaaagatctacctgcaggtccagtggcactgaaccaaagctcagga
tggaagcctggttccattccccacacatcttcagccattgaaccaagtggttgggaggaa
ccctcacctcagtccattagcaggaagatggagattgatgatggtacctcagcctggggt
gaccctactcactatgagaacaggagtgtcaacatgtgggaaaggagcaacgtgcagcat
aggggtcagccttctcaactaaagcatgagtccatgccaggccccacaccgaccagcaaa
gacaaaaacacaggatgggagcggagtaccaatgcacctgaacaggttatggagaacagc
agtgcaggatgggggaaggcctttgatgctccctcgagctggagggatacagaggaacct
gggaaagggacaggatggagcaggtcccgctccaatccacctaacactgcttcgaaaact
atgcaagatggctggggcgatgaaggtttaaacacgtcacgccattccagttgggaggag
gacgatggtggtcctggcatgtggggtaacaggtctcaggaaaacacttcctccttttct
tctgggggttggaaccagggtcagagttgtaggagaactgcagcaaagggtcctctgaag
ggcaacgttgggggtccctggacaagctcggtcactcggcagttctcaaacatggggatc
acggaagaagacgctgtctcagcatcagacaggagcagaagagggatgaacgactttaat
ggtgatatgaggaggggaggaagaggaggaggaagctttcgctcacatggctttaaagaa
ccgggcacgtcaggtgtgtttaataccggtggacatttacgaggaatgcagcagcccggt
gtgcatcatgtaaatacttcccctggagtacgagcacaagtgcctcagcagttcctccct
cctcaggtttcagggtctgtcctgaatccgatgttccccccacagctctctcctcagaac
ctggctatgctcagtgggataaacccccacatgcagcaggtccagctggcgtatcagctc
ctcctacagcagcagcagcaacagcatttcctgtctcagaggaagttcccccatcctcct
cctcctcttcttccacatcaggacccacagcagttggcccgtatcatggcagttcttcag
cagcgccccaaaacccccacatctttcccagggtttgttccgggggtggagcctgagtca
ctgatgggaggagtaaaggaagtgggaggagctcagcctcagtttaaatggatgatggag
gctgggcatccgctgtgtccctcacctcctgatccaataatgattaagaatggtctttta
cctggtccgatgaagctcagaggcgactcctcgttcccccactatgacctggtggagaat
gtgggcgtggcctctccaaatctcatcgacaattggcacaggagcccaggtgccaaatta
ggctccgcccctaacactcccacctggcccccagagtttcagcccggtgttccctggaaa
ggtgttcagagccccgagcctaacccgaacccctacagtggaattctgggcgagaacaca
ctctctgatactgaacaccacttactgcaggatcacacagagctgaacaccaccatactg
ccttcacctgctgcctggccttactgtccctccgacacacacaactcagctaagttccca
gcaccgcccaccagctggcccccggatccaatcggacacaggaccaatcgaaacagctcc
cagatgccccgcccacctccaggcctgacccatcagaaacagtcttcgtggttaggggtg
gggcctcacgtacccagagggtggagctcagagagccaggagtcaccttttggtacagag
agctcatggagtggtggagcatctacaggaagttcatggctactgctgagtaacctcaca
ccacagatcaacagctccaccctaaagaccatctgcctgcaacacggcccactgatgacc
tttaacctcagcttggctcagggcagcgctctgattcgctaccgcagcccggaggaggcg
gccaaggcccagagcgcgctgcacatgtgtgtcctgggtaacaccagcatcctggcggag
tttgtgagtgaggaggacgtggcccgttacttcacacattcccagagcagagagacagac
ggggagacggacagagagacggagagtgagacgggcggaggaggaggagggggagtgggg
gaggtgaagctcggctgggagaacctggacggagccggtctctccctgtttaaccagtgg
agccacgcccaggagcctggggtctggggaggtgtggctcctggttaccatggcaacaac
ctctggggttctcctcaggtggaggacagggggcagggcttgttaccgggcaacctgtta
gggggtggggctgacaatctgtga

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