KEGG   Clarias gariepinus (North African catfish): 128516203
Entry
128516203         CDS       T10780                                 
Symbol
rab5aa
Name
(RefSeq) RAB5A, member RAS oncogene family, a
  KO
K07887  Ras-related protein Rab-5A
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar04137  Mitophagy - animal
cgar04144  Endocytosis
cgar04145  Phagosome
cgar04148  Efferocytosis
cgar05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    128516203 (rab5aa)
   04145 Phagosome
    128516203 (rab5aa)
   04137 Mitophagy - animal
    128516203 (rab5aa)
   04148 Efferocytosis
    128516203 (rab5aa)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128516203 (rab5aa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgar04131]
    128516203 (rab5aa)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgar04147]
    128516203 (rab5aa)
   04031 GTP-binding proteins [BR:cgar04031]
    128516203 (rab5aa)
Membrane trafficking [BR:cgar04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    128516203 (rab5aa)
 Endosome - Lysosome transport
    128516203 (rab5aa)
Exosome [BR:cgar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128516203 (rab5aa)
  Exosomal proteins of other body fluids (saliva and urine)
   128516203 (rab5aa)
  Exosomal proteins of colorectal cancer cells
   128516203 (rab5aa)
  Exosomal proteins of bladder cancer cells
   128516203 (rab5aa)
GTP-binding proteins [BR:cgar04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    128516203 (rab5aa)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 128516203
NCBI-ProteinID: XP_053346495
LinkDB
Position
28:19163016..19172921
AA seq 215 aa
MANRGAPTRPSGSNGGSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFTRAKNWVKELQ
RQASPNIVIALSGNKADLANKRAVDVQEAQSYADDNSLLFMETSAKTSMNVNEIFTAIAK
RLPKSEPQASGAAPGLGQGVIRPDMAPPPATGKCC
NT seq 648 nt   +upstreamnt  +downstreamnt
atggccaatcggggggcaccgactcggccaagcgggtccaacgggggcagtaagatctgc
cagttcaaactggtgctgctgggagagtctgcagtgggcaagtcaagtctggtgctgcgt
tttgtcaagggccagtttcatgagtttcaagagagcacgataggagcggccttcctgacg
cagacggtgtgcctggatgacacgacggtgaagtttgagatctgggacacagccgggcag
gagcgctaccacagtctggcccccatgtactacagaggagctcaggccgccatcgtggtc
tacgacatcactaatgaagaatcgttcacgagagcgaagaactgggtaaaggagctccag
aggcaggccagtccgaacatcgtcatcgctctgtccgggaacaaggcggacctcgccaac
aagagagctgtcgacgtccaggaagcccagtcatacgcagatgacaacagtttgcttttc
atggaaacctcggccaagacctccatgaacgtgaacgagattttcacggctatcgctaaa
aggttgccgaagagtgagccacaggcgtctggagctgcccccgggctcggtcagggcgtg
atacgacccgacatggctccgcctcctgcgactgggaagtgctgctaa

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