Clarias gariepinus (North African catfish): 128516926
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Entry
128516926 CDS
T10780
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
KO
K10803
DNA-repair protein XRCC1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03410
Base excision repair
Brite
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
128516926 (xrcc1)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128516926
NCBI-ProteinID:
XP_053346582
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Position
Unknown
AA seq
597 aa
AA seq
DB search
MPEIKLKHVVSCSSEDSTHKADNLLSSDTYRKWKCARPGEKQLSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGHSTSIKDQDFEVLLVTSSFMSPSESRGNSNLNRVRFFGPQQLVKSSS
QEKWDRVKIVCTQPYSKNIAYGLAFIKFHSPPDNDAPAATPPKLTKLGQFRVKDESPSPR
SSLQPGSLFLKRESTDGAGVRGSPKNTTLSYAAAALHTEPSTVSPAPTYSPQAAVPVKRK
FEFSKERQDAPPPSAKRHTPPPKHNTQDSENTHTSTSTKTVSISQKSPGQKSSVKPRPRP
SEPIPFNRIMEGVVFVLSGFQNPFRGELRDKALAMGARYRPDWTSDATHLICAFTNTPKY
SQVKAAGGLIVRKEWVMDCHKRKQKISYKRYLVDGAESSTEEEDSGAEERTHHEERKKKS
PKKRDGAAVNSVKEERSDGSVDERDEEHGGDDGDDGSGMDTEDELRRVEKRKEKAGQEVE
DDPYGGSTDENTDAEEEEDKPIPELPDFLTGKRFYLYGKFPENQRRLLLRYIVAFNGAVE
DYMNEKVQFVITSQGWDDSFEDALMENEKLSFVKPTWIFAINDRQRMLPYQPYTVVP
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgccggagattaaactgaaacacgtggtgtcctgcagcagcgaggacagtacccataaa
gcagacaacctgctgagctcagacacctacaggaagtggaaatgcgctcgtccaggagag
aagcagctgtcagtcatcctgcagtttgaaaaggaggagcaggtccacagtattgacatc
gggaacgaggggtcggcttttattgaagttctggttggacactcgacctccattaaagac
caggactttgaggtgttgttggtgacatcatcatttatgtctccatctgagagtcgcggg
aattcgaacctgaaccgcgtgcgtttcttcggccctcagcagctggtgaagagttcgagt
caggagaagtgggacagagtgaagatcgtctgtactcaaccctacagcaagaacattgca
tatggattggcgtttataaagtttcactctccaccggataatgatgcacctgctgctaca
ccacctaagttgactaagctgggacagttccgtgtgaaggacgagtccccgtcccccagg
tcgagtctgcagccggggagtttgttcctgaagcgagagagtacagacggtgcaggtgtg
aggggttctcctaaaaacactacactgagttacgctgcagcggcgctacacacagagccg
tctactgtaagccccgcccccacctactcacctcaggctgctgtacctgtgaagagaaag
tttgagttcagtaaagagagacaggacgccccccctccctccgccaagagacacacacct
cctcccaaacacaacacacaggatagtgagaacacacacacctccaccagcactaagaca
gtgtccatttcccagaagtccccggggcagaagtcctctgtgaagccccgcccccggccc
tcagagccaatcccctttaaccgcatcatggagggcgtggtgtttgtactgagtggattc
cagaacccgttccgtggagaactccgagacaaggctctggccatgggggcgcggtaccga
cccgactggacctccgacgccacacacctcatatgtgccttcactaacacccctaagtac
agccaggtgaaggcagcgggggggctgatcgtcaggaaggagtgggtgatggactgtcac
aagaggaaacagaaaatctcttacaaacggtatctggttgacggagctgagtcgagcact
gaggaggaggacagcggtgctgaggagcggacacaccacgaggaaaggaagaaaaaaagt
cctaaaaagagagacggtgccgctgtgaattcagtgaaagaggagcggagcgatggatca
gtggacgagcgagacgaggagcatggtggtgatgatggtgatgatggatcaggcatggac
actgaagatgagctgagaagagtggagaagaggaaggagaaggcaggacaggaggtggag
gacgacccgtatggaggctctacagatgagaacacggatgctgaagaggaggaggacaaa
cccataccagagctcccagacttcctaacaggaaagcgtttttatctttacgggaaattt
cctgagaatcagcgacgcctgctgctgcgttacattgtagcctttaacggtgctgtggag
gactacatgaatgagaaggtccagtttgtgatcaccagtcagggatgggacgactccttc
gaggacgctctgatggagaacgagaagttgagttttgtgaagccgacatggatttttgcc
attaatgatcggcagaggatgttgccctaccagccttacactgtagtgccctaa
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