Clarias gariepinus (North African catfish): 128517000
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Entry
128517000 CDS
T10780
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04310
Wnt signaling pathway
cgar04520
Adherens junction
cgar04916
Melanogenesis
cgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128517000 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128517000 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
128517000 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128517000 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128517000 (lef1)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
128517000 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128517000
NCBI-ProteinID:
XP_053346704
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MPQLAGGGGAGDPELCATDEMIPFKDEGDPQKEQSFAEITNSEEEGDLAELKSSLVNESE
TSPNSNSHDAARQSQITPDSYHEKHREHPDDGKLQDLYSKGHAYSGYPSYIMMTNMNNEP
YMNNGSLSPPMPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGPHSGHHPQDAKGMQRH
HPGPDITNFYSVGQMTPPLGWFPHHMVPGPPGPHATGIPHPAIVNPQVKHEPPHETDLMH
MKPHHDQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALS
REEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESASGTAQRMKTAYI
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctggcgggtggaggaggcgcgggagacccggagctctgcgccacggatgag
atgatcccgttcaaggacgagggagacccgcagaaggagcagagcttcgccgagatcacc
aactccgaggaggagggagacctggccgagctcaagtcctctctggtcaacgaaagtgaa
acgagtcccaacagcaacagccacgacgctgctagacagtcacaaataaccccagactcc
tatcatgaaaaacacagagaacatccagatgatggaaagctccaggatctgtacagtaaa
ggccatgcttactctggttacccaagttacatcatgatgaccaacatgaacaacgaaccc
tacatgaacaatggctcgctctcgcctcccatgcccagaacgtcgaataaggttccagtg
gttcagccgtcccacgcagttcaccccctcacacctctgatcacctacagcgatgagcac
tttgcccccggccctcactccggtcaccaccctcaggacgccaaaggaatgcagaggcat
caccccggtccagacatcactaacttctactcagttggacagatgaccccaccactgggc
tggttcccacatcacatggttccaggacctcccggacctcacgccacgggaatcccccac
cctgccatcgtcaacccacaagtcaaacatgagcctccacacgagacggacctgatgcac
atgaagcctcatcacgaccagcgaaaggagcaggagcccaaacggcctcacatcaagaag
ccgctcaacgccttcatgctttacatgaaagagatgcgcgccaacgtcgtagccgaatgc
acgctgaaggagagcgccgccatcaaccagatcctgggcagaaggtggcacgctttatct
cgggaagagcaagcgaagtattatgaattggcccgcaaggaacggcagctccacatgcag
ttataccccggctggtctgccagagacaattatggaaagaagaagaaaagaaagagggag
aagctccaggaatcagcctcaggtacagcccagagaatgaaaacggcgtacatctga
DBGET
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