Clarias gariepinus (North African catfish): 128517004
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Entry
128517004 CDS
T10780
Name
(RefSeq) ras-related protein Rab-33B
KO
K07920
Ras-related protein Rab-33B
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128517004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128517004
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128517004
04031 GTP-binding proteins [BR:
cgar04031
]
128517004
Membrane trafficking [BR:
cgar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
128517004
Others
Specific organelles associated proteins
Auto phagosome
128517004
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128517004
GTP-binding proteins [BR:
cgar04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
128517004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
GTP_EFTU
SRPRB
MMR_HSR1
RsgA_GTPase
G-alpha
ATP_bind_1
AAA_22
NPHP3_N
AAA_16
AAA_25
DUF4805
NACHT
Motif
Other DBs
NCBI-GeneID:
128517004
NCBI-ProteinID:
XP_053346711
LinkDB
All DBs
Position
Unknown
AA seq
214 aa
AA seq
DB search
MDSCDCWIPVVCRTCKVIVLGDAGVGKTSLTHLYCTGHFPGKTDPTIGVDLRERLLYLRG
EKIKVQLWDTAGQERFRKSMAQHYYRNVHAVVFVYDVTNAASFRSLPLWMEECHQHSVGP
DVPRVLVANKADLVNLGNASTVEQARHLAEVHSMSFYLCSAKSGSREQVDAIFSKLVQQI
SRQRRKGSESDRAFKLTPKANAEEEKKEKWTCNC
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtgtgactgctggatcccggtcgtgtgtcgcacctgtaaagtcatcgtgctc
ggagacgcaggtgtcgggaagacgagcctcactcacctgtactgcactggacacttccca
gggaaaaccgaccccacaatcggggtggacctccgggagagactgctgtacctgcgcggc
gagaagatcaaggtgcagctgtgggacactgcgggtcaggagcgctttcggaagagcatg
gcccagcactactaccgcaacgtacatgcggtcgtctttgtctacgatgttacaaatgcg
gcttcgttccgcagtctgcccctctggatggaggagtgtcatcaacactcagttggacct
gacgtcccccgtgtacttgtggctaacaaggctgacttggtgaacttgggcaacgcatca
actgttgagcaagcacggcacttagctgaagttcactcaatgtccttttacctctgttca
gctaaaagtggcagcagagagcaggtggacgccatctttagtaaactggtacagcagatc
agtagacaacgacgaaaaggatcagaatcagacagggctttcaaacttacaccaaaagcc
aacgcagaggaagagaaaaaggagaaatggacctgcaattgctga
DBGET
integrated database retrieval system
