Clarias gariepinus (North African catfish): 128517019
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Entry
128517019 CDS
T10780
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03022
Basal transcription factors
cgar03420
Nucleotide excision repair
Brite
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128517019 (gtf2h1)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128517019 (gtf2h1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128517019
NCBI-ProteinID:
XP_053346731
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Position
2:complement(30276078..30286126)
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AA seq
549 aa
AA seq
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MTALSEEVLLVVKKVRQRKQDGTLYLMTERIAWGPEGKDRFTVSHPYADIRCQKISPDGK
SKIQLQLVLHTGESTTFHFANESTALKDRDAAKDLLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLKLNAVDHSMSNNNNQEVGISAAFLADIRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKQKYAENVPHSMTEKEFWTRFFQSHYFHRDRISTGQQ
DIFSECAKQDEKGLKSMVVQGVKNPMVDLQSLEDKMLDEGYGSLTVPSTSNSSKTVKENS
NSAIIKRFNHHSAMVLAAGLRKVEALTDQASETSGTDGNSRDSDCFQPPIKKVKLQEAIE
YEDLENESGPKTIALNLKKSDRYSHGPVPLQSQHYSTSQDIINSISSIREEMSCYKPCLT
QVMSSSAASSAITALSPGGVLMQSGPQQTISQLVPGDVQSELKHLYTAAGELLRHFWSCF
PVNTPFLEEKVVKMQSNLERFQSTKLHPFHEKIQREYISTNLISHLEEMIQAAYNKFHAW
QTRRMMRKT
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgacagccctgtcggaggaggtgctgctggtggtgaagaaggtccggcagaggaaacag
gatggtactctttacctgatgaccgagcgcatagcctggggtccagagggaaaagatcgc
ttcactgtcagccacccgtatgctgacatccgttgtcagaagatcagtccagatggcaaa
tcaaagatccagcttcagttggtgttacacacaggagagagcacgaccttccactttgcc
aatgaaagcacggctctgaaggacagggatgctgccaaagacctgctgcaacagctcctc
cccaagtttaaaaagaaagctaacaaagaactagaggagaaaaacaggatgctgcaggaa
gacccagtactgtttcagctctataaagacctggtagtgagtcaggttatcagtgcggaa
gaattctgggccaatcggttaaaactaaatgctgtagatcactccatgtccaataacaat
aatcaggaagtgggaatatcagcggcttttctggcagacattaggccacagactgatgga
tgtaatggattaagatacaacctaacctctgacatcatcgaatcgattttcagaacatac
cctgcagtcaaacagaaatatgctgaaaatgtgcctcacagcatgacagaaaaggaattc
tggacacgcttctttcagtcacactatttccacagagatcgcattagcactggtcagcag
gatatcttttctgaatgtgccaaacaagatgagaaaggtttaaagtctatggttgttcaa
ggtgttaagaaccctatggtggatctccagtccctcgaggataaaatgttagatgagggc
tacggctcattaacggttccctcaacgtccaactccagtaaaacggtaaaagagaatagc
aactctgccatcatcaaacgcttcaaccatcacagtgccatggtgctggcagctggtcta
cgcaaagtagaagcactgactgaccaggccagtgagaccagtgggacagatgggaattcc
agagactcggactgctttcagccaccgattaaaaaggtgaaattgcaagaggctattgag
tatgaggacttggagaatgaatctgggcctaaaacaattgccttgaatcttaaaaaatct
gaccggtattcacatggtccagttcccctccagtctcaacactactccacaagccaagac
atcatcaattcaatcagctcaataagggaggagatgagctgctacaaaccctgccttact
caggtgatgtccagcagtgcagctagttcagctataacagctctttcacctggaggagtt
ttaatgcaatctggaccccaacagaccatcagtcagttggtaccaggtgatgttcagagt
gaactgaagcacttgtacacagctgcaggagaactgctacgacacttctggtcctgtttt
ccagtcaacacgcccttcctggaggagaaggtggttaagatgcagtccaatctggagaga
tttcagtcaaccaagctccacccattccatgagaagatccaacgggaatacataagcacc
aacctgatcagccatttagaagagatgatacaggctgcctataataagttccatgcttgg
cagacacgccgtatgatgagaaaaacctga
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