Clarias gariepinus (North African catfish): 128517177
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Entry
128517177 CDS
T10780
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Membrane trafficking [BR:
cgar04131
]
Protein recycling
Others
Retriever complex
128517177 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128517177
NCBI-ProteinID:
XP_053346961
LinkDB
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Position
Unknown
AA seq
974 aa
AA seq
DB search
MTSLCFCPPASTPRRSRTRNYGAELRSCRAPAVPVQSGDYHPLKPITVTDSKSRRGARKG
STSSSSSSSGSVAPDPLSSMLEGTDPLSLFAAAASAGDAPALPHSSSSVELGRKRREKEE
EVGGDFEPWSAKRGEILARFTTTEKLSINLFMGSEKSKATSPSSAVSEKVRTRLEELDDL
EEGSQRELLNLSQQDYVNRIEELNQSLKEAWATDQKVKALKIVIQCSKLLSDTSVILFYP
SKFVLITDILDTFGRLVYDRIWSMCSDPDPLPDSFSVDDVNDTARETCLNWFFKIASIRE
LIPRLYVEAAILKCNRFVNKSGIQETLPRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPN
LKDSLNKNFFDLLASFRQIHSDSVQNQLVIQRVEIPVYLTLYSPAIHWILQCVAYRAPDV
LLTEMMERCKKLGNNALLLNSIMWAFRAEFVATRASDFIGMIKECDEAGFPKHLLFGSLG
RSLACADPPESERLPVLNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLADI
IKHMTPDRAFEDAYPQLQSVMKKILTYFHNFSVLFSMEKFLPFLDMFQKDSVRVEVCKSI
MDVFIKHQQEPTRDPVILNALLHVCKTMHDSVNALTVEDEKRALALLINGFIRMVSFGRD
FEQQLSFCVEARATFCNLESVIIQLVHTVNHLAMETRRVMGGNHSRKTAAFVRACAAYSF
ITIPSLSSIFSRLHLYLLSGQVALANQCLSQADSFLKAAVGILPEVPRVISVEGKQRSSE
PFLLDFISNFLSTLLVVPDHPEQGVLYLVRGLLNMVQDYTWEDNSDAKVRVYISALPLLA
AMSQESYLYTIPKVESNETLYGGDPKFIAEISRVCETVIGQVLDYLKTLSQDEGARRQGA
LAFSLFSCLLAHGDLRINKLNQLAVNLWNLSHKNGYCDTRASVRTLEHIKQQAQQPDAAH
LSDMLLRLSLQSRA
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgacatcactgtgtttttgtccccccgcttccacacccaggcgttcccgcacgcggaac
tacggcgcagagctgcggagctgccgagcgccggccgtcccggtgcagagcggagactac
cacccgcttaaacccattacagtgacggattccaagtcccgccgcggcgctcgaaaaggc
agcacgtcctcctcgtcctcgtcctcgggctccgtcgctcccgacccgctgagctccatg
ctggagggcaccgaccccctgtccctcttcgccgccgccgcctcggccggcgacgccccc
gcgctgccccacagcagctcctccgtggagctcgggaggaagcgcagggaaaaagaagag
gaagtgggcggggactttgagccgtggtcggctaaacgcggcgagatcctggcccggttc
accaccacggagaagctgtctataaacctcttcatgggctctgagaagagtaaagccacc
agccccagctctgcagtctcagagaaagtgcgcactcgtctggaggagctggacgacctg
gaggagggctctcagagggagctcctgaacctttctcagcaggattatgttaaccggatc
gaggaactgaatcagtccctaaaggaggcgtgggctacggaccagaaagtcaaagcgctc
aaaatcgtcattcagtgctccaagctgctttccgacacgtctgtgatcctgttctacccc
agcaagttcgtcctgatcacagacatcctcgacacgttcggtcgtctggtgtacgacaga
atctggtccatgtgctcggatccggatcctctgccagactcgttttcggtggacgacgtg
aacgacacggccagagagacctgcctcaactggttcttcaaaatcgcctccatcagagag
ctcatccctcgcctatacgtggaggcggccatactgaagtgcaaccgctttgtaaacaag
tccgggattcaggagacgcttcctcgtctcacagctatgatccgggggatcggggaccct
ctggtggccgtgtacgctcgagcctacctgtgcagggtgggcatggaggtggcgccgaac
cttaaagacagcctgaacaagaacttcttcgacctcctggcgtcgttcagacagattcac
agcgacagtgttcagaaccagctggtcatccagagggtggagattcccgtctacctcacg
ctgtattctcctgccatccactggatcctgcagtgtgtggcctaccgagcccctgatgtg
ctgctaacagaaatgatggagaggtgcaagaagctcggcaacaacgcgctcctcctaaac
tccatcatgtgggccttccgggccgagtttgtggccacacgagccagcgacttcatcggc
atgatcaaggagtgtgacgaggctgggtttcccaagcacctcctgttcggctctctgggc
cgcagtctcgcctgcgccgaccctcccgagagcgagaggctgcccgtccttaacgaggcc
tggaaggtcatcacgaaagtgcgcagcccacaggactacatcaactgtgcagagatctgg
gtggagtttacctgccgtcactttaccaaaagggaggtgaataccgtgctggctgacatc
atcaaacatatgacccctgaccgcgccttcgaggacgcgtatccacagttgcagtcagtg
atgaagaagatcctcacctactttcacaacttctctgtcctcttctccatggagaagttc
ctacccttcttggacatgttccagaaagacagcgtgagggtggaagtttgtaaatccatc
atggacgtcttcatcaaacatcagcaggagccgactcgtgacccggtcatcctcaacgct
ctgctccacgtctgtaagaccatgcacgactcggtcaatgctctcacagtggaggacgag
aaaagagctctagctctgctgatcaatggcttcatccgcatggtatcttttgggcgggac
tttgagcagcagttgagtttctgcgtggaggccagagcaaccttctgtaacctggagtca
gtcatcattcagctggttcatacggtgaatcatttagccatggagaccagacgagtcatg
ggcgggaatcactcgcgcaaaacggcggcgttcgtccgggcttgtgcagcgtacagcttc
atcaccattccgtctctcagcagcatcttcagccgtctccatctctacctgctgtcggga
caagtggctctggccaatcagtgcctgtcccaggctgattccttcctgaaggcagcggtg
ggcattttgcccgaagtgccccgtgtcatcagcgtggagggtaaacagcgctcctctgag
cccttcctcctcgacttcatcagtaacttcctctccacgctgctggtggtgccggaccac
cctgagcagggtgtgttgtacctggtgagagggctgttgaacatggtgcaggactacacc
tgggaggacaacagcgacgctaaagtgcgcgtgtacatcagtgcgttacccctgctggct
gccatgagtcaggagagctacctctacaccattcctaaagtggagtcgaacgagacgctg
tacggcggcgaccccaagttcatagcagagatcagccgcgtgtgtgagacggtgattgga
caggtgctggattacctgaagactctgagccaggacgagggagcgcgccggcagggagct
ctggctttctctctgttcagctgcttgttggctcacggagatctgcgcatcaacaaactc
aaccaactcgccgttaatctgtggaacctgagccacaagaacggctactgcgacacgcgc
gcctcggtgcgtaccctggagcacatcaagcagcaggcccagcaacccgacgcggctcac
ctctccgacatgctcctgcggctctccctgcagtcacgagcctga
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