Clarias gariepinus (North African catfish): 128518061
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Entry
128518061 CDS
T10780
Symbol
hars
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128518061 (hars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cgar01007
]
128518061 (hars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgar03016
]
128518061 (hars)
Enzymes [BR:
cgar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
128518061 (hars)
Amino acid related enzymes [BR:
cgar01007
]
Aminoacyl-tRNA synthetase
Class II (A)
128518061 (hars)
Transfer RNA biogenesis [BR:
cgar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128518061 (hars)
Prokaryotic type
128518061 (hars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
128518061
NCBI-ProteinID:
XP_053347175
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All DBs
Position
2:complement(13501117..13516907)
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AA seq
525 aa
AA seq
DB search
MATLGLVCARLCAGLTGRRASPWLRPLRCLSGMTVSQIDEEVAKLLELKARIGGDDGKQT
FVLKTPKGTRDYNPKQMAIREKVFNIIISCFKRHGAETIDTPVFELKETLTGKYGEDSKL
IYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQ
CDFDIAGQYDAMIPDAECLKIVYEILSELDLGDFHIKVNDRRILDGMFAVCGVPDEKFRT
ICSTVDKLDKLPWEDVKNEMVNEKGLPEEVANQIGEYVSMQGGLDLAERLLQDTRLSQNK
QACAGLNDMKQLFSYLQLFQVTDKVVFDLSLARGLDYYTGVIYEAVLSQTIQPAMPAAAE
QNGAASGDEAGVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEMS
AEKIRTTETQVLVASAQKNLLEERLRLTAELWNAGVKAEVLYKKNPKLLTQLQHCEETGI
PLVAILGEQELKDGVVKLRNVANREEVDVSRADLVEEIKKRTPQS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccactctcggcttggtgtgtgcgcgtctctgtgctggactgacgggacgccgggct
tcaccttggctccgcccactgcgctgcctttctgggatgacggtatctcagatcgatgaa
gaagttgccaaactgttagagctaaaggctcgtattggaggagacgatggaaaacaaacg
tttgttctcaagacaccgaaggggaccagggactacaaccccaaacagatggccatcaga
gagaaggtcttcaacattatcatcagctgctttaaacgccatggtgctgaaaccatcgac
actcctgtcttcgagcttaaggaaacgttgacggggaaatatggcgaagactccaaactc
atctacgatctgaaggaccaaggaggagagctgctgtctctcagatacgacctaactgtt
ccttttgctcgctacttggccatgaacaagatcactaacatcaaacgctatcacatcgcc
aaggtgtaccgcagagacaaccccgccatgacccggggccgctaccgagagttctaccag
tgtgattttgacattgctggtcagtatgacgccatgatcccagatgcagagtgtttaaaa
atcgtttatgagatcctaagtgagctggacctgggcgacttccacatcaaggtgaacgac
cgacgcatcctggacgggatgttcgccgtgtgcggcgttccagacgagaaattccgcacc
atctgctcgactgttgacaaactggacaagttgccatgggaagatgtgaagaacgaaatg
gtgaatgaaaaaggcctgcctgaagaagtggctaatcagatcggggagtacgtcagcatg
cagggtggacttgacctggcagagaggcttcttcaggacaccaggctttcccagaacaag
caggcgtgtgccggcctcaacgacatgaaacagttgttcagttacctgcagctttttcaa
gttacagataaggtggtgtttgatttgagcctggcacgtggtttggactactacactggc
gtgatctacgaggctgtcctgtctcagaccatccagcccgcgatgccagctgccgcagag
cagaacggggctgcgtcaggggacgaggcaggggtgagcgtgggcagcgtggcaggcgga
ggccgttatgacggactggtgggcatgttcgaccccaaggggagaaaagtaccctgtgtc
ggcgtcagcatcggcatcgagaggatcttctctataatggagcagaaagcagagatgtct
gcggaaaaaattcgtactacagaaacccaagtcctggtggcctcagcacagaagaacctc
ctggaagagagactcagactgacagctgagctctggaatgcaggagtaaaggctgaggtg
ctgtacaagaagaaccccaagctcctgactcagctgcagcactgtgaggagaccggcatc
cccctggtcgccattctgggtgaacaggagctcaaagatggagtcgtcaaactgcgcaac
gtggccaaccgagaggaggtggatgtgtccagggctgacctagtggaagaaatcaagaaa
aggacaccgcagtcctga
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