Clarias gariepinus (North African catfish): 128518063
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Entry
128518063 CDS
T10780
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128518063 (lamb4)
04518 Integrin signaling
128518063 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128518063 (lamb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
LAMININ_IV_B
LAMB4
CLIP1
F5_F8_type_C
ATPTG10
CdiA_CT_tRNase
Motif
Other DBs
NCBI-GeneID:
128518063
NCBI-ProteinID:
XP_053347179
LinkDB
All DBs
Position
2:25492854..25512100
Genome browser
AA seq
1864 aa
AA seq
DB search
MDIFFTFLHWICSFNCPMIFTAKATMVRRWMSAVLLLLLVVPAHLQEECERSSCHPTLGD
LMVGRAAQLSASSTCGLNGPQNYCILGYLEEEQKCFTCNSRSPYNRYNNPNSHQIENIIT
TFEPERKMKWWQSENGVHQVSIQLDLETMFQFSHLVMTFKSFRPAAMLVERSKDFGRTWK
VFRYFSVDCAADFPRISSGPAEAIDDLICDSRYSGAEPSTDGEVVLKALDPNFHIENPFD
PIIQDLISMTNLRVNFTRLLTLGDDLLGRKKRNPQDKYYYALYEMVVRGSCFCNGHASQC
MPVYNTRGDALNEPGMVHGRCVCLHNTMGNNCEKCQDFYNDAPWRPAGSTDPHVCRRCNC
NGHSERCHFDLQRYRNTGQVSGGVCDDCRNNHMGAQCERCKPHYYKDPLRSLSDPYACIP
CACHSAGSVDGGLCDPVSGQCMCKQNVEGEHCDRCKIGFYRLSQEDINGCQRCMCNFLGT
LSTSPCDQNTGQCICDRFAHGSECDQCVPGYWGLGNTVYGCLPCDCDIGGAFTTLCDSEN
GQCRCRANMVGRRCSEPAPGYFLAPLDFYLYEAEIAIPLDTKCSSHLVKPSPSPGPPVNP
ITSRPLPHCPHGTIVREPTPPPEEPYVPDPTEPSTYENNQPPVAYYTSPPAVTLPSCANY
FRSRGYDVEFRDGRFVVVKRERRRKRRQGQFTIPLQPGSLHQVILRPHTPDEPISWTGPG
VVRVQDGAGLRFIVTNIPLTLNYHLVVRYEPQTTDDWTASVKIVPLGSSNENCPYDPSEK
TFTLPGTSKAAILDPTVCLSAGVRYYVDITFENPDRYCSSHILIDSMGLIPKMESLPNFC
SDVTLTQYQHYRCVELGAQAGEQTLPEVCENLIASMSAYIHNGAIPCRCNPEGSFSSSCS
KFRGQCDCRPNVVGRCCDSCAPMTYGFGKKGCSSCNCEPQGSKAKFCDHKTGQCQCHNGI
TGRRCDRCLPGYYGFPNCKRCQCNELADLCDPITGACLNCREHSTGPQCERCVEGYFGDP
LIREPCKPCLCPNVKGSGRFFAHSCENDPNSLTPTCQCWTGHQGFKCDKCAPGYYGNLLL
AGATCKECPCNNNIDPNDDEACDALTGQCLRCLHNTYGPRCQTCKPGYFGNALLQDCREC
SCDRQGTDVTRCPLGSPCLCDQVTGQCPCRRGVEGIRCDRCKDGYWNLGGNSGCQPCNCH
TSHSLSNQCDKITGQCPCETGYGGKQCKDCAANHFGNPDIQCISCDCDIQGFVYPGCDPD
TGECLCRPGVSGNFCEKCAPGHVQDFPACEPCHPCYHLWETNVTDISQAIENMKVLLSKY
EGSLSVNDKRHQEKIQKLNEKLQSLVSMLGYDRDDLGSVENFLNQIRNLTETIDPNTIIV
DPSKLLESEIDHIYQEFKRLLDDLKKKIEAGQRIDLKKLNDDLEKIRKLHAGFLKDEERV
KKARNKIDTSRLIRQDIKKELTKCQLRPLDVLEKKVKGLSVAKLNEEICGAPGDVDCEIA
VCGGALCGKCGGPSCTGSLPVALNATDTAKKIKAGIQSLLQNLTEAETKVKDIKNMNRDV
KTKAQNMKDKVLRNKNKFEKAKNETKKLIERVREYLSAETMEPEDIDKVASTVLAIKLPS
SPDEIRRMIQNIQKIMENFTHITEDLKDLEDKAKLATDLKNKADEILNQTKEIDISDIEK
VINETAQLHNKIKKKLNETQDNINVTDELLDQSTTKLNNAEENLDTPRPKTLQKEIEALK
NKTEMNRAQALEAKTAADAALANVTDANKDLEEVEEQLKKLKNNTQGLNDTALEHLKNIT
IETENMAKDVENKMKQIQVLEKRIQTAVQDKMNKMKELEDLLAEATSLRQYIVEKVDNYS
QCGS
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atggacatattctttacatttctgcactggatctgttcttttaattgtcctatgattttc
acagcaaaagcaacaatggtccgaaggtggatgtctgcagtgctgctccttttgctggtg
gtgccagctcacttacaggaagaatgtgagaggagctcgtgccaccctaccctaggtgat
cttatggtgggccgtgctgctcaactttctgcctcttccacctgtggcctaaatgggccc
cagaactattgcatcctgggatacctggaggaggaacagaaatgtttcacatgcaactca
agaagcccctacaatcgatacaacaacccgaatagccatcaaattgaaaatatcattaca
acctttgagccagagcgtaagatgaagtggtggcagtctgagaatggtgtgcatcaagtc
agcattcaactagacttggagactatgtttcagtttagccatttggtcatgacattcaag
agttttagacctgctgcaatgctggtggagaggtcaaaagattttggtcgtacttggaag
gtgtttcggtacttctctgtagactgtgctgcagacttccccagaatctcatcaggccca
gcagaagctatagacgacctcatctgtgacagccgctactctggagctgagccttctact
gatggagaagtggtgttaaaagctttggaccccaactttcatattgaaaatccgtttgac
cctatcattcaagacctcatcagcatgactaacctgcgagtgaacttcacacgtttactc
acactgggtgatgacttgttgggacggaagaagaggaacccacaggataaatactactat
gctctctatgagatggtggtcagggggagctgcttctgcaatggccatgccagccagtgt
atgcctgtttataacacacgtggagatgctttaaatgaacctggcatggttcatgggcga
tgtgtgtgtctacacaacaccatggggaacaactgtgaaaagtgccaagatttttacaat
gatgccccctggaggccagctggaagcactgacccacatgtttgcagaaggtgcaactgc
aatggccattcggagagatgtcactttgacctacaacgttacagaaacactgggcaggtc
agtggtggtgtgtgtgatgactgcagaaacaaccacatgggcgctcagtgtgagcgatgc
aagccacactactataaggaccctctccgctctctaagtgatccctatgcctgtatacct
tgcgcttgccactcagcagggtctgtggatggtggattgtgtgatccagtgagtggtcaa
tgtatgtgtaagcagaacgtagagggcgagcactgtgatcgatgcaaaattggattctat
agactcagccaagaagacattaacggttgccagaggtgtatgtgtaactttttgggcact
ttaagcacctctccatgtgatcagaacacaggtcaatgcatttgtgatcggtttgctcat
ggatctgagtgtgaccagtgtgtaccgggatactggggactaggaaacaccgtctatggt
tgtctaccatgtgactgtgacataggaggagccttcactactctgtgtgactcagagaat
ggtcagtgtcggtgcagagccaatatggtgggacgtcgctgtagtgaacctgctcctggt
tacttcctggcccctcttgatttctatctctatgaggctgaaattgctattcctctggac
actaaatgttcctctcacctggttaaacccagtccttccccaggtccacctgtgaaccct
attacatctcgtccacttcctcactgtccccatggaaccatagttcgtgagcccacaccc
ccgcctgaggaaccttacgtgcccgaccccactgaaccatctacatatgagaataatcag
cctcctgtagcatattacacttcacctcctgcggtcactctgcctagctgtgcgaactac
tttaggagcagaggctatgatgttgaattcagggatgggagatttgtggtggttaagcgt
gagagacgccgcaagcgaagacaaggccagttcaccattcccctgcagcccgggtctctc
catcaggtcattctacgaccacatacaccagatgaacccatttcttggactggaccagga
gttgtgcgggttcaagatggagcaggactccgattcattgtcaccaacatcccactaact
cttaattatcatcttgttgttcgctatgagccacagaccacagatgattggacagctagt
gtaaaaattgtcccattaggatcttctaatgaaaattgtccatatgatccatcagagaaa
acttttacgcttcctggaactagcaaggctgccattttggatcctactgtctgtctcagc
gctggcgtgcggtactatgtggatatcacatttgaaaatcccgaccgttactgcagctca
catattctaattgattcgatgggacttattccaaagatggagtctctgccaaatttctgc
tctgatgtaaccctgactcagtaccagcattatcgctgtgtggagttgggtgcacaggca
ggggaacagactctacctgaggtgtgtgaaaacctaattgccagcatgtcagcatacatc
cataacggtgcaattccttgtagatgtaatcctgaggggtcattcagctcatcctgcagt
aaatttagaggacaatgtgactgcagacccaatgtggttggccgctgttgtgactcttgt
gcccccatgacctatggatttggaaaaaaaggctgctcatcatgtaactgtgagccacag
ggttccaaagctaagttctgtgaccataagaccggacagtgccagtgccataatgggatt
acaggccgacgatgtgataggtgtctgcctggatactatggttttccgaactgcaaacgt
tgccagtgtaacgagctggctgacctctgtgacccgattactggagcatgtctaaactgc
agggagcattcgactgggccccagtgtgaaaggtgtgttgaaggttactttggtgatccc
ttaataagggaaccctgcaagccatgcctctgtccaaatgtgaaaggcagtggacgtttc
tttgcccactcctgtgaaaacgacccaaactctctaaccccaacctgtcaatgctggaca
gggcatcaaggtttcaagtgtgataagtgtgcacctggttactatggtaacctgcttttg
gcaggcgctacatgcaaagaatgtccctgcaacaacaacattgatcccaatgatgatgaa
gcatgtgatgctttaactggccagtgtctccgttgcttgcataacacttatgggcctcgg
tgccagacatgtaaaccaggatactttggcaatgcactacttcaggactgcagggaatgc
tcatgtgaccggcagggcacagatgtgactaggtgcccactgggcagcccctgcctatgt
gatcaggtgacagggcagtgcccatgtcgacgtggtgtggaaggcattcggtgtgatcgt
tgtaaggatggatactggaatctgggtggaaattccgggtgtcagccgtgtaactgtcac
acaagccactccctcagcaatcagtgtgacaagattacaggccagtgtccttgtgaaaca
ggatatggtggtaaacagtgcaaggattgtgcagccaatcattttggaaaccctgacatt
cagtgcatatcctgcgactgtgacatccagggatttgtctacccaggctgcgatcctgac
actggcgagtgtctgtgtaggcctggagtaagtggaaatttctgtgaaaagtgtgcccca
gggcatgttcaggacttccctgcctgtgagccctgccacccttgttatcatctctgggaa
acaaatgtcacagacatctcacaagctatagaaaacatgaaggtcttgctctctaaatac
gaaggatctctttcagtcaacgacaagcgacatcaggaaaagatacaaaagttaaatgag
aagcttcaaagcctggttagcatgctaggctatgaccgggatgatctgggaagcgtagag
aatttcctaaatcaaataaggaacttaacagaaaccatagatccaaacacaattattgtt
gatccatctaaattgctggaaagtgaaattgatcatatttatcaagaatttaagaggtta
ctcgatgatctgaaaaagaaaattgaagctggccaaagaatcgatctgaaaaagctaaac
gacgacctggagaagatccgtaagctccatgctggtttcctgaaagatgaagaacgggta
aagaaggcaagaaacaagatagacacttccaggctgatccggcaggacataaaaaaagag
ctgaccaaatgccagctgcggcccctggatgtactggagaagaaggtcaaagggctcagt
gtggccaagcttaatgaggagatttgtggagcaccaggcgatgtagactgtgaaatagct
gtgtgtggtggtgctctgtgcgggaagtgtggtggaccgtcgtgtacaggaagtctccct
gttgccctcaacgccacagacacagcaaagaagatcaaagcaggcattcaaagtctgctc
caaaatctgacagaggcagaaacaaaggttaaagacatcaaaaatatgaatagagatgtg
aaaaccaaggcacagaatatgaaagataaagtcctaaggaacaagaacaagtttgaaaag
gccaaaaatgaaactaaaaaacttatagagcgtgtaagggaatatctcagcgcagagaca
atggaaccagaagacattgacaaggtagcctctactgtgttggctattaaacttcctagt
tccccagatgagattaggaggatgatccagaatatacagaaaataatggagaacttcaca
cacattacagaagacctgaaggacttggaggataaggccaaattagccacagacttgaaa
aataaggctgatgagatcctaaaccaaacaaaggagattgatatcagtgacatagagaaa
gtcataaatgaaactgctcaactccacaacaagataaagaagaagctgaatgagacgcaa
gacaacataaatgttactgatgaattacttgaccagagcaccacaaaactaaataatgct
gaagaaaatttagacacaccacggcccaaaacactccaaaaggaaattgaggctctgaaa
aataaaacggaaatgaatcgagctcaggctttggaagcaaaaactgctgcagatgctgca
ttagccaacgttacagatgctaacaaggatcttgaggaagtagaagaacagttaaaaaaa
ctgaaaaacaacactcagggtctaaatgatacagctcttgagcacctgaagaacataaca
atagagactgaaaatatggcaaaagacgttgaaaataaaatgaagcaaattcaagtgttg
gagaaaaggattcaaactgcagtacaagataaaatgaacaaaatgaaagaactggaagat
ctgttggcagaggcgactagtttgcggcaatatattgttgaaaaagtggacaattattcg
caatgtggcagctaa
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