Clarias gariepinus (North African catfish): 128518289
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Entry
128518289 CDS
T10780
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128518289 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128518289 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128518289 (vps28)
Membrane trafficking [BR:
cgar04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
128518289 (vps28)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128518289 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
128518289 (vps28)
Exosomal proteins of colorectal cancer cells
128518289 (vps28)
Exosomal proteins of bladder cancer cells
128518289 (vps28)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
128518289
NCBI-ProteinID:
XP_053347297
LinkDB
All DBs
Position
3:complement(22113912..22119956)
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AA seq
223 aa
AA seq
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MFHGIPASGGIGGAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTGACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VNLWLTTLSSMSAADELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatggaatacctgcttcaggaggcatcggaggagctccagccaataagcctgaa
ttatatgaggaagtaaagctgtacaaaaatgcccgggaaagagaaaagtacgacaacatg
gccgagctgtttgctgtggtgaagacgctccaagcattggagaaagcgtacattaaggac
tgcgtgactcccaatgagtacacgggcgcctgctccagattgctggtgcagtacaaggct
gctttcaaacaggtccagggatcagatgttggctcaatcgatgacttttgtaggaaatac
aggctcgactgtccactcgcaatggagagaataaaagaagatcgcccaattaccataaag
gatgacaagggcaatttgaatcgctgcattgcggacattgtgtctctcttcatcacagtc
atggacaaactgcggctggagattcgagccatggatgagatccagccagaccttcgggaa
ctgatggagacaatgaacaggatgagcaacatgccgccagattcagaagccaaagacaaa
gtcaatctttggttgaccacactgagcagcatgtctgccgccgacgagctggatgactcc
caagtccgccagatgctttttgacctggagtccgcctacaatgccttcaaccggttccta
cactcgtcctaa
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integrated database retrieval system
