Clarias gariepinus (North African catfish): 128518327
Help
Entry
128518327 CDS
T10780
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128518327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128518327
03016 Transfer RNA biogenesis [BR:
cgar03016
]
128518327
03012 Translation factors [BR:
cgar03012
]
128518327
04131 Membrane trafficking [BR:
cgar04131
]
128518327
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128518327
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128518327
Transfer RNA biogenesis [BR:
cgar03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
128518327
Translation factors [BR:
cgar03012
]
Eukaryotic type
Elongation factors
128518327
Membrane trafficking [BR:
cgar04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
128518327
Exosome [BR:
cgar04147
]
Exosomal proteins
Proteins found in most exosomes
128518327
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
128518327
NCBI-ProteinID:
XP_053347363
LinkDB
All DBs
Position
3
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEITKEVSAYIKK
IGYNPAAVAFVPISGWHGDNMLEPSTNMGWFKGWKIERKEGNASGTTLLDALDAILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHESLP
EATPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGSFNAQVIILNHPGQISMGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMIPGKPMCVESFSTYPP
LGRFAVRDMRQTVAVGVIKSVEKKAAGAGKVTKSAQKAAKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagacccacattaatatcgtggttatcggccacgtcgactctggaaag
tcaaccaccaccggccatctgatctacaaatgtggaggcatcgataagagaaccatcgag
aagttcgagaaggaagccgctgagatgggtaagggttccttcaagtacgcctgggtgttg
gacaaactgaaggcagagcgtgagcgtggtatcacaatcgacattgccctctggaagttc
gagaccagcaagtactacatcaccatcattgatgcccctggacacagagacttcatcaag
aacatgatcactggtacctcacaggctgactgtgctgtgctgattgttgctggtggtgtt
ggtgagttcgaggctggtatttccaagaacggacagacccgtgagcacgccctcctggcc
ttcaccctgggagtgaagcagcttatcgttggagtcaacaagatggactccaccgagccc
ccatacagccaggctcgctttgaggagatcaccaaggaagtcagtgcttacatcaagaag
attgggtacaaccctgctgccgttgctttcgtcccaatttctggatggcatggagacaac
atgctggagcccagcacaaatatgggatggttcaagggatggaagattgagcgcaaggag
ggaaatgccagtggcaccactctcctggatgccctggatgccatcctgcccccaagccgg
cctactgacaagcctcttcgtctgcccctgcaggatgtctacaaaatcggaggtattgga
actgtacccgtgggccgtgtggagactggtgtcctcaagcctggcatggttgtgaccttc
gccccagtcaacgtgaccactgaggtcaagtctgttgagatgcaccacgagtccctccct
gaggcgacccctggtgacaacgttggcttcaacgtgaagaacgtgtctgtgaaggacatc
cgccgtggtaacgtggctggagacagcaagaacgacccacccatggaggctggcagcttc
aatgctcaggtcatcatcctaaaccaccctggtcagatctctatgggctacgctccagtg
ctggattgccacactgctcacattgcctgcaagtttgctgagcttaaggagaagattgac
cgtcgttctggtaagaagcttgaggacaaccccaagagcctgaagtctggagatgccgcc
attgttgaaatgattcctggcaagcccatgtgtgttgagagcttctccacctatcctcct
cttggtcgttttgctgtgcgtgacatgaggcagaccgtagctgtcggcgtcatcaagagt
gttgagaagaaggctgctggtgctggcaaggtcacaaagtctgcacagaaggctgccaag
accaagtga
DBGET
integrated database retrieval system
