Clarias gariepinus (North African catfish): 128518352
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Entry
128518352 CDS
T10780
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128518352 (irx3a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
128518352 (irx3a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
128518352
NCBI-ProteinID:
XP_053347392
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Position
3:complement(5479903..5483561)
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AA seq
432 aa
AA seq
DB search
MSFPQLGYQYIRPIYPQDRQGISSARSGSELSPSGALSNVLSSMYGSPFTAAAHTYGAFL
PYSNDLSIFSQLGAQYELKDSPGVQHPAFAHPHPAFYPYGQYQFGDPSRPKNATRESTST
LKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRTDE
EGNVYGSDHEGEDGDKREDEEEIDLENIDTEHIESKDELDEQDELHSDSKLDASCDSEIS
DGYEDLQGPEPKLLKAVAQEGKDAHGDGDADRPDHFHHHHHHLHHHHHHHLDHSLDLKTQ
PANSEQIKLNPVSNSPPVENNAAPVQKPKIWSLAETATSPDNPRKSPLVNGSSSQAVMPP
HRLVSCPVGKLQNWTSRAFSAHQLALLNSNHYLGLANQASANNLALYTGNRHTEERNVSS
ETAHTGTSHPPH
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccacagttgggataccagtacatccgtccgatctacccgcaagaccggcaa
gggatcagcagtgcgcgcagcgggagcgagctgagtccgtccggcgcgctctccaacgtt
ctttccagcatgtacggatcacctttcaccgccgccgcacacacctacggagcgtttctt
ccctattcaaacgacctgtctattttcagtcagttgggagctcagtatgagctaaaagac
agtccaggtgtccagcacccagcatttgcccatcctcaccctgctttctatccttacggc
cagtaccagtttggagatccgtccagacccaaaaatgccaccagggagagcacaagtacg
ctgaaggcctggctcagcgaacaccgcaagaacccgtatcccaccaagggagagaagatc
atgctggccatcatcactaaaatgaccctcacccaagtgtccacctggttcgccaacgcc
cggaggagactgaagaaagagaacaaaatgacctggaccccgcgaaaccgcactgacgaa
gagggcaacgtgtacggcagcgaccacgaaggcgaggacggcgacaagcgcgaggacgag
gaagagatcgacttggagaacatcgacacggagcacatcgagagcaaggacgagctggac
gagcaggacgagctccactcggactcgaagctggacgccagctgcgactcggaaatctcg
gacggctatgaggatttacaggggcccgagccgaagcttttaaaagccgtggcccaagag
ggcaaagatgcgcacggggatggagacgctgatcgcccagatcactttcaccaccaccat
caccacctccatcaccaccaccaccatcaccttgatcattcattagacctcaaaacgcag
cctgcgaacagtgagcagatcaaactcaacccggtatccaactctcccccggtcgagaac
aacgcagccccggtgcaaaaacctaagatctggtcattggcagagacagccacgagcccg
gacaatccccgtaaatctccactcgtgaacgggagctcatcccaggccgtcatgcctcct
catagacttgtttcatgcccggtgggcaaactgcagaactggacgagccgtgcgttctcg
gcgcaccaactcgcgctgctcaactcaaatcattatttaggactggccaatcaggcttca
gccaacaacctcgcgctgtacacgggcaacaggcacacggaagagcgcaatgtcagctca
gagactgcacacacaggtacatcacatccccctcactga
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