KEGG   Clarias gariepinus (North African catfish): 128518418
Entry
128518418         CDS       T10780                                 
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic-like isoform X1
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar00260  Glycine, serine and threonine metabolism
cgar00630  Glyoxylate and dicarboxylate metabolism
cgar00670  One carbon pool by folate
cgar01100  Metabolic pathways
cgar01200  Carbon metabolism
cgar01230  Biosynthesis of amino acids
cgar01240  Biosynthesis of cofactors
cgar04981  Folate transport and metabolism
Module
cgar_M00141  C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    128518418
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    128518418
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    128518418
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    128518418
Enzymes [BR:cgar01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     128518418
SSDB
Motif
Pfam: SHMT DegT_DnrJ_EryC1 SHCBP_N SAM_Ste50p
Other DBs
NCBI-GeneID: 128518418
NCBI-ProteinID: XP_053347485
LinkDB
Position
3:20703613..20737502
AA seq 522 aa
MSKFIRKNMPRILSYWRCYHQERSLHHVTLQYTRQQQANSKSIENTDVYSFNKSTRESHD
HMMLEPLSTNDPEVFNIIQNEKRRQMHSLTLNASENFTSRAISEALSSCISNKCFHLSLR
YSADADSVDELERLCKERALKVFRLDPEKWGVNVQPYSGSSANFAVYISLLEPRGRIMGL
DPCDGGHHSHGFIMGKEKLSATSIFFDSRSYKVDQETGYIDYDQLEEGARSFKPKLIIAG
TSSYSRNLDYRRLRDIANKNGAYLLGDMAHISGLVAAGVVPSPFDYCDIVSTSTYKTLRG
CRGGAIFYRKGVRSVDAKTGKETLYNLERSICEAVFPRLQGGRHNHSIAGLAVALNQALT
PEFKAYQVQVLANCRTLVSSLIEKGYKIVTGGTDTHLFLLDLRPNGIDGMKTEKVLQDCA
IVCNRSRCPGDSPLQASGLRLGSPALTSRGLVEEDFCTVAELLHRGIQLAVEIQTNTNPK
CTLKEFTATLCQDKKYQKRIIEIQNEVEAFVGKFPMPGLPGL
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgagcaaattcataagaaaaaatatgcccaggattttgagttactggaggtgttatcat
caagagagatcattacaccatgtcactttacagtatacaagacaacagcaggctaacagc
aagagcattgaaaatactgatgtttattccttcaacaagagcacacgtgaatcacatgac
catatgatgctggagcctctcagcactaacgatccagaggtatttaacatcatacagaat
gagaagaggagacagatgcatagtttaacacttaatgcatctgagaattttaccagtcgt
gctatttcagaggccctgagctcatgcataagcaacaaatgctttcatttaagtcttcgg
tactctgctgatgcagacagtgtggatgaactggagcgcctctgtaaggaaagagcgttg
aaggttttcaggcttgatccagaaaaatggggcgttaacgttcagccttattctgggtca
tctgcaaactttgctgtgtacatatcattattggagcctcgtgggaggatcatgggtctg
gatccgtgtgacggaggccaccatagccatggatttataatgggcaaagagaaattatct
gctacctctattttctttgattcacggtcatacaaggtcgaccaagagactggttacatt
gattacgaccaactagaggaaggtgctcgttcattcaagccaaaactaatcatcgcaggt
accagctcctactcacgtaacctggattaccgtcgtctgcgtgacattgcaaataaaaat
ggtgcgtacctgctgggtgacatggcacacatcagtggacttgttgcagcgggagtggtt
ccgtcccccttcgattactgtgatattgtttcgacctctacctataagaccctgagaggc
tgcagaggcggagccatattttacaggaaaggtgtgcgcagtgtggatgcaaaaacagga
aaggaaactctttacaacctggagagatcgatctgtgaagctgtgttccccaggctgcag
ggaggacgtcacaaccattccatcgcaggactggctgtagcattaaaccaggcactgact
ccagaattcaaggcttaccaagtacaggtgctggcaaactgcaggactttagtgtcttct
ttaatagaaaagggctacaaaattgtcacaggtggtacggatactcaccttttcttgctc
gaccttcggccaaatggaatcgatggaatgaagacagagaaggtgctacaggactgcgct
atcgtctgtaacaggagccggtgtccaggtgatagtccactgcaggcctctggcctgcgt
ttaggctcacctgctctcacatcacggggcttagtggaggaggatttctgcacagtggcg
gaattactacacagaggcattcagctagctgtggagatccagacaaacacaaaccctaaa
tgcactttaaaggagttcacggcaactttatgtcaggataaaaaatatcaaaaaagaata
atagaaatccaaaacgaggttgaggcttttgttggaaaattccccatgcctggactgcct
gggctttga

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