Clarias gariepinus (North African catfish): 128518491
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Entry
128518491 CDS
T10780
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128518491 (fubp1)
03041 Spliceosome [BR:
cgar03041
]
128518491 (fubp1)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128518491 (fubp1)
Spliceosome [BR:
cgar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128518491 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
KH_PNO1_2nd
Secretin_N
Motif
Other DBs
NCBI-GeneID:
128518491
NCBI-ProteinID:
XP_053347610
LinkDB
All DBs
Position
1:49084197..49091253
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AA seq
651 aa
AA seq
DB search
MADYTSVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGDGVNPPPVANDFNYGGQKRPLE
DADQPETKKVASDPFAAMGGMAGLPRPTSEEFKVPDGMVGFIIGRGGEQISRIQQESGCK
IQIAPDSGGMPDRSVTLTGSPDSIMTAKRLLSEIVEKGRPTPFHHNDGPGMSVQEIMIPA
SKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRISGDPFKVQQAKDMVMDL
IRDQGFREQRGEYGSRMGGGEGLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVKIQFKPDD
GTTPDRIAQIMGPPDRAQHAASIITDLLRSVQAGGPPGPGGRGRGRGHGGNWNMGPPGGL
QEFSFTVPTVKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNIKMFTVRGTPQQI
DYARQLVEEKIGGPVSPMGGPHGPPGPHGGPGPHGPPGPPGPPAPMGPYNPGPYNQGPPG
PHGPPGPYQPQGWGNGYPHWQQGQPDPNKAAADANAAAWAAYYAQYQQQPQAPMTPNPAA
APGTAPANGQGDPQAPGQSGQADYTKAWEEYYKKMGQQGQPQDYTKAWEEYYKKQGDVAG
QAAPQAAGASSSQPGGQPDYSAAWAEYYRQQAAMYGSQPVGAGPPAQQVHS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggccgactacacgagcgtggcgccgccgtcctcaaacgccggcggaggaatgaacgac
gcttttaaagatgcattgcaacgggcaagacagatagcagctaaaatcggaggtgatgga
gttaatccccctcctgttgccaacgactttaactatggagggcagaaaaggcctttggaa
gacgcggatcagccagaaacaaagaaagtcgcaagtgacccttttgctgcaatgggtgga
atggctggtcttccaaggcctacgtcagaagagttcaaggttccagacggcatggttggt
tttattatcggaagaggaggagagcaaatttcaaggatacagcaggaatcggggtgcaag
atacaaatcgctccagacagcggaggtatgcccgaccgctctgtgactctaacaggttct
ccagattccatcatgaccgcaaagaggttattgtcagagattgtggaaaaaggtagacca
accccgtttcatcacaacgatgggcccggaatgtcggttcaggaaattatgatcccggcg
tccaaagcaggcctcgtcattgggaagggaggagagactattaaacagttacaggagcga
gctggagtcaagatggtcatgattcaggacggtcctcagaacaccggggcggacaaaccg
ctcagaatttctggagatccttttaaagttcagcaagctaaagatatggtgatggacctg
atcagagaccagggtttccgagagcagaggggcgagtacggatcacgtatgggtggcgga
gaaggtttggatgttcctgtgccgcggtttgcagtggggatcgtgattggcaggaacggc
gaaatgatcaagaagattcaaaacgacaccggtgttaagattcagttcaagccagatgat
ggcaccacaccagaccggatcgctcagattatgggtccccctgatcgggcacagcacgca
gcaagtattattacagatctgttgcgcagcgtgcaggctggtggtccaccgggtcccggt
ggcaggggcagaggtcgtggccacggcggcaactggaacatgggcccaccagggggtctg
caggagttctccttcactgtacccactgttaagactggtcttattattggcaaaggaggc
gagacgattaaaagcataagccagcagtccggcgcgagaatagagttgcagcgcaaccct
cctcccaatgccgaccccaatataaagatgttcacagtgcgtgggacgccgcagcagatc
gactacgccaggcagctcgtagaagaaaagattggaggtcccgtcagtcctatgggtgga
ccacacggacccccagggcctcacggaggccccggaccgcacggccccccaggcccgcct
ggacctcctgcacctatgggaccttacaatccggggccttataaccagggacctcctggc
ccacatggtcctccagggccgtaccaacctcagggctggggtaacggctaccctcactgg
cagcagggccagcccgatccgaataaagccgcagcagatgctaacgctgcagcatgggct
gcatattacgctcagtaccagcagcagcctcaggctcccatgacgcccaaccccgctgcc
gccccgggtactgctccagccaacggtcaaggtgacccgcaggctccaggtcagagcgga
caggcagattacaccaaggcctgggaagaatattacaagaaaatgggtcaacaaggccag
ccacaggattacaccaaagcgtgggaggagtactataagaaacaaggtgacgttgcaggt
caggcagcccctcaggcagccggggcgagctcctctcaacccggaggccagcctgactac
agcgccgcgtgggctgaatattaccgccagcaagcggccatgtacggctctcagcccgtg
ggagcaggaccaccggcccagcaggtacactcttga
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