Clarias gariepinus (North African catfish): 128518614
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Entry
128518614 CDS
T10780
Symbol
atxn1a
Name
(RefSeq) ataxin-1a
KO
K23616
ataxin 1/1L
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128518614 (atxn1a)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
128518614
NCBI-ProteinID:
XP_053347770
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Position
3:28953683..29064132
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AA seq
766 aa
AA seq
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MKSNQERSNECLPPKKREIPACTLPSEDRPMVMAPASESQRGGNLAWLASMASGHEGKKQ
HTSSSTESEGPQFKPMVSTVESARAPTVTTTIPAVHPSPLSQHTGPIQYSPMPPNVHFIS
PSYGAPYTSYISPLLPPASTTTTTSSQRHTEAYTGTTSSPASKHDPVISTSDTIPQPHST
QYVQISSSQLSVVPCTASSPQSHLPHHLQHTLALSGPSQFLLQYSDGPMPKKEDGRPREM
LNGEPERSRRFNQLSEPKISSIAKGSLSTQHHHIHQREHYETRHMTLPPEYVQENNNLRN
SLVLVPNSHNSSNVDPGGNQDKLPPPLAPAEKGGICAGKPVSRTSSSTSHPFPPPPLPVD
SLKAAVTTLSPHAVIHTTHSATEPLSLGLTSTNFYPAHQPIIGYIAGTGQPQHVSYHTSL
PPHLLIPGTQPVIIPVSGAEATATSTAPTFAAALPHAFVTSATPKGESFETPASYPHSTG
AVVQAQLHLPILPASASLPATPPIPSTPALPPYFTKGSIIQLADGELKRVEDLKTEDFIQ
SAEISSELKIDSSTVERIDSSHTPNSAIIQFAVGEHRSQVNVEVLVEYPFFVFGQGWSSC
CPDRTTQLLELPCARLAVGDVCISLTLKNLKNGSLKKSQGQISDAASLGPPLKPPFKAPS
GGTRRAARHMEQENGLTQCGRQGGVSSPASKENGELGSAEKGASRIPTSSESESISKPTG
RKRRWSAPEGRKVEKHEEEPPLTLPRPSFIPQEVKISIEGRSNIGK
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaagagcgaagcaatgagtgtttgcctccaaagaaacgtgaaattcca
gcatgtacccttccctcagaggataggcccatggttatggcgcctgccagtgagagccag
cgtggagggaaccttgcttggcttgccagcatggccagtgggcacgagggcaaaaagcag
cacaccagcagctcaacagaatctgaaggcccacagttcaaaccaatggtgtccactgtc
gagtccgctcgtgctccaactgtaacaactaccatccctgctgtgcatccttcaccactt
tctcaacacacaggccccattcagtactcacccatgccccccaatgtgcactttatcagc
ccatcatatggagcaccctatactagctacatatctcctcttctgccccctgcatccacc
accaccaccacatcctcccagcgacacactgaagcttacactggtactacttcttctcca
gcatccaaacatgatccagtaatttccacttcagacaccatacctcaaccccattccacc
cagtatgtccaaatttccagctcccaactcagtgtagtgccttgtactgcatcctcaccc
caaagccaccttccccatcatcttcaacatacactcgctcttagtgggccctctcagttt
ctgcttcagtactcagatggacccatgcctaaaaaggaagatggcagacctagagagatg
ctaaacggtgagccggaaagaagccgtcgcttcaaccagctctccgaacccaagatcagc
agcatagccaaagggtctttatccacccagcatcaccacatccaccagcgagaacactac
gagacccggcacatgacgcttccgccggaatatgtccaggaaaataacaacctaaggaac
tcattagttctagttcccaacagtcataactccagcaatgtagatccagggggaaatcaa
gacaagctaccaccccctctggccccagctgaaaaaggaggcatctgtgcaggaaagcca
gtttctcgcacttcctcaagcacctctcatccctttccacctcctcctttacctgtggat
agtctaaaggctgcagttaccacactttcaccccatgcagttatccataccacacatagt
gcaaccgagccactgtcccttggcctcacgtccaccaacttttatccggctcatcagccc
attattgggtacattgcaggtacagggcagccacagcatgtcagttaccacaccagcctc
cctccacacctgcttatcccaggaactcagcctgttattatccctgtaagtggagcagaa
gctactgccacatctacagcaccaacttttgctgcagcactgccgcatgcatttgtgacc
tcggcaaccccgaaaggtgagtcctttgagacaccagcctcctacccccattcgacaggt
gctgtggttcaggcacaactacacttacctatcctgccagcctctgctagcctgccagct
actccacctataccctccacacccgctttaccaccctacttcaccaagggttccatcatt
caactagctgatggggagctgaagcgtgtggaggacctaaagacagaggactttattcag
agtgcagaaatcagcagcgaactgaagattgactctagtactgtggagcgcatcgacagc
agccatacacctaactctgctattattcaattcgcagtgggagagcatcgttcacaggtg
aatgtcgaggtgctggttgagtaccctttctttgtgtttggtcagggatggtcgtcttgc
tgtccagaccggaccactcaactgctggaacttccttgtgccaggctagctgtgggcgat
gtctgcatttccctcactctaaagaacttgaaaaacggctctttaaaaaagagtcagggg
cagatttcagatgctgccagtcttgggccacctcttaaaccaccttttaaagcaccctca
ggtgggactcgcagggcagcgcggcacatggagcaggagaacggactgacacagtgtggc
aggcagggaggcgtgagctccccggcaagcaaagaaaacggagaactaggttcggccgaa
aaaggagcctctagaattccaacatcctcagaatcggaatctattagtaaacctacaggg
cggaaacggagatggtcggccccagaaggtcgcaaagtcgagaagcatgaagaggaacca
cccttaactcttcccaggccatcgtttatccctcaggaggtgaaaatcagcattgaaggc
agatcgaatattggcaaatga
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