Clarias gariepinus (North African catfish): 128518627
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Entry
128518627 CDS
T10780
Symbol
hgs
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03250
Viral life cycle - HIV-1
cgar04144
Endocytosis
cgar04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128518627 (hgs)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128518627 (hgs)
04145 Phagocytosis
128518627 (hgs)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128518627 (hgs)
Membrane trafficking [BR:
cgar04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
128518627 (hgs)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
Adaptin_N
XMAP215_CLASP_TOG
FYVE_2
HEAT_Maestro
UIM
CID
Cnd1
FYVE_CARP1-2
RasGEF_N_2
Motif
Other DBs
NCBI-GeneID:
128518627
NCBI-ProteinID:
XP_053347792
LinkDB
All DBs
Position
3:complement(33673923..33694750)
Genome browser
AA seq
770 aa
AA seq
DB search
MGKGAGTFERLLDKATSQLLLETDWESILQICDLIRQGDAQAKYAIAAIKKKLNDKNPHV
TLYALEVLESVVKNCGQTIHDEVASKQTMEELKELFKKQTEPNVRNKILYLIQAWAHAFR
NEPKYKVIQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKH
HCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCFEHLNNHPSLSPPSRKAEGKSSSSS
SSSSGQSDLPPEYLTSPLAQQSQMPPKRDEAALQEEEELQLAIALSQSEAEEKERMRQKS
SYPVYPKADPTPVTSSAPPVSTLYSSPVNSSAPSAEDVDPELARYLNRTYWEKKQEEVRK
SPTPSAPAPVPLAEPMPVSQPVESHAPVQPINIVEQQYQNGESEENHEQFLKALQNAVTT
FLNRMKSNHMRGRSITNDSAVLSLFQSINNMHPQLLELLNQLDEKRLYYEGLQDKLAQVR
DARAALNALRDEHREKLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEMQRQLAIQRLQE
QEKERQLRLEQQKHTIQMRAQMPAFSLPYAQMQSLPPNVAGGVVYPPAGPPSFPGTFSPA
GSVEGSPMHGVYMNQPGQPGGGPYQAMPVSATDPNMVNAYMYQTAGTGGQPAAPGQAPPP
NTSPPYTNYQPTPTQGYQQNMASQAPSLPPMSQPAQTNGMAYMGYQPYSMQNMISALPGQ
DHNMPPQQQYMPGQQPMYQQLAPPGGPQQQAQQPQQPPAGSAEAQLISFD
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaggtgcaggaacgtttgagaggctgttggacaaagccaccagtcagctcctg
ttggagacagactgggaatccatcctgcagatctgcgatctcatccgccaaggagatgcg
caggcgaaatatgcaattgctgccatcaagaagaagctcaatgacaaaaatccacatgtg
actctctatgccctcgaggttttggagtcagtggtgaagaactgtggccagacgattcat
gatgaagtggcgagtaagcaaaccatggaggaactcaaggaactgttcaagaaacaaacc
gagccgaatgtcaggaacaagatcctgtacctgatccaggcctgggctcacgccttccgc
aacgagcccaagtacaaagtgatccaagatacttatcagatcatgaaggtggaaggtcat
gtgttcccggagtttaaagagagcgatgccatgtttgctgcagagagggctcctgattgg
gtggacgccgaagagtgccacagatgcagagttcagttcggagtaatgacccggaagcat
cattgcagggcgtgtggacagatcttctgtggcaagtgctcctccaaatactccactatc
cccaagttcggcattgagaaagaagtgcgagtgtgtgagccctgctttgagcacctcaat
aaccacccctccctctctcccccttccaggaaagctgaagggaagagcagcagcagcagc
agcagcagcagtggacaatctgatctgccacctgagtacctgaccagccctctggctcag
cagtctcagatgccccctaagagagacgaggcagcgctgcaggaggaagaggagctgcag
ctggctattgcgctctcccaaagtgaagctgaggagaaggagagaatgaggcagaagagc
tcgtaccctgtgtaccccaaagctgacccgactccagtgacctcctccgcaccacccgtc
agcactctgtactcctctcctgtgaactcttctgctccttcagctgaagatgttgaccct
gagctggctcgttatctgaataggacttactgggagaaaaagcaggaggaggtgcgcaag
agtcccaccccttctgctcctgctccggtgccattggctgaaccaatgccagtcagccag
ccagtggaaagccatgctcctgttcagcccatcaacatagtggagcagcagtaccagaac
ggcgaatcggaggagaaccacgagcagttcctcaaggctctacagaacgcagtcacaacc
tttttaaaccgcatgaagagcaaccacatgcgcgggcgcagtattaccaacgacagcgcc
gtgctctccctcttccagtccatcaacaacatgcacccgcagctgctggagctcctcaac
cagctcgacgagaagagactgtactatgaaggactgcaggataagctggcgcaggttcgg
gatgcacgcgccgcattgaacgctctaagggacgagcaccgcgagaaactgcgccgtgcc
gctgaggaggctgagagacagcggcagatccagcttgcccagaaactcgagatcatgagg
cagaagaaacaggagtatctggagatgcagagacagctggctattcagcgtctgcaggag
caggagaaggagaggcagctgcgtctggagcagcaaaaacataccatccagatgcgtgct
cagatgcctgctttttccctcccttatgcgcagatgcagtcattgccacctaacgtggca
ggcggggtcgtgtatccacctgctggtccccccagtttccctggcacattcagccctgct
ggctcagtggagggctctcccatgcatggggtctacatgaaccaacctgggcagcccgga
ggaggaccctaccaggccatgccggtgtcggctacagatcccaacatggtgaacgcatac
atgtatcagaccgcagggaccggtggacaacctgctgcccctggtcaggcaccacccccg
aacaccagccctccatacaccaactaccagcccactcccacacagggctaccagcagaac
atggcatcacaagccccgagcttgcccccgatgtcccagcctgcccagaccaacggaatg
gcctacatgggctaccagccgtacagcatgcagaacatgatatccgcacttcctggacag
gaccacaacatgccccctcagcagcagtacatgcctggtcaacaacccatgtaccagcag
ttggcgccccctggaggtcctcagcagcaggcacagcagccccagcagccccctgcaggc
agcgcagaggctcagctcatttcttttgactaa
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