KEGG   Clarias gariepinus (North African catfish): 128518647
Entry
128518647         CDS       T10780                                 
Symbol
elp2
Name
(RefSeq) elongator complex protein 2
  KO
K11374  elongator complex protein 2
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cgar03016]
    128518647 (elp2)
Transfer RNA biogenesis [BR:cgar03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    128518647 (elp2)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_Gbeta WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C WD40_RFWD3 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 128518647
NCBI-ProteinID: XP_053347835
LinkDB
Position
3:27130733..27165898
AA seq 824 aa
MASPVITTCHVACCANRTPHVLSWSRRGLIAFGSCNSVALYDPHDVRVVGLLNKHRSRVN
TVRWIHREDCGPETQLVSGGSDNNVIVWEEQHGQFAASVVCSGHSGPVCAVDAVPLSPSD
SLLVSSSSDSTVKLWKYSSGKAECLQTLSFGSGFMMDVSLALLPSSRVPILACGGDDSKV
HLFVQISGQFQKVLVLQGHEDWVRGVEWAAKEGELLLASCSQDCLIRVWRLVVKCDTHAE
EAAEGTIRMKEDVFETKGKMYAVSLETVLAGHENWVYGIHWQPSFIKGGTLEQPLSLLSA
SMDKTMILWGPEEESGVWVEQVRVGEVGGNTLGFFGCQMAPDGSRILAHAFHGALHLWQR
DPSQKREWSPAVVLSGHFNAVQDLSWDSEGDFLLSVGSDQTTRIFAPWRRKDCSQVTWHE
IARPQIHGYDMQCLAMVGRFLFVSGADEKVLRVFKAPRNFVENFANIVGTSLEKLLASPD
AAGLPEGASIPALGLSNKAVFQGDLTVQSTQEEGEDFNRVSDQYKESYFHPLSLTEPPPE
DHLLQNTLWPEVQKLYGHGFEMFCLASDSARTVVASACKASKAEHAAILLWSTTTWKQLQ
ALPCHSLTVTQMAFSSDSRLLLAVSRDRTWSLWRREDSGPETSDPKFTLYTCTSKDSAVH
TRIIWSCDWSQDNKYFVTASRDKKVIMWGHHGSGDPVGMNESAVIPCSSALDVGDSATAV
SICPFLLSDQSYLVAVGLESGQIVLYKWRPADDVSLGSDWSRCAETDVSQSHTLVVKRLR
WRPRVCQQDESEGLNKQHQSTSVQLASAGADHTVKIFNINTLTL
NT seq 2475 nt   +upstreamnt  +downstreamnt
atggcgagccccgtgataacaacatgtcatgtagcgtgttgtgctaaccggaccccacac
gttctctcatggagccgcagagggttaatcgccttcgggtcgtgtaattcagttgcgctg
tatgacccacatgacgtaagggtggttgggttgctgaataaacacagaagcagagtgaac
acggtgcgctggatccacagggaggactgtggtccagaaacacagctggtatcaggagga
tctgataataatgtaatagtgtgggaggagcaacatggtcagtttgccgcctctgtggtg
tgttcaggccactcgggtcctgtgtgtgctgtggatgccgtaccgctgtctccctccgac
tcactgctcgtctcttcatcatcagactccactgttaaactgtggaagtacagcagtgga
aaagctgaatgcctccagacgttatcttttgggagcggcttcatgatggatgtctccttg
gcactgttgccaagcagcagagttcccatcctggcatgtggtggggatgacagcaaagtc
catctttttgtgcagatcagtggacagtttcagaaagtgctcgtacttcaaggccatgag
gactgggtccgtggtgtggaatgggcagcaaaagagggggagttacttttggccagttgc
tctcaggattgtctgatccgagtgtggaggctggtggttaagtgcgacacgcatgcagag
gaggctgctgaaggaaccattaggatgaaggaggacgtgtttgagacgaaggggaaaatg
tacgcagtgagtcttgagacggtattagctggccacgagaactgggtgtacgggattcac
tggcagccttcatttatcaaaggtggtacactggaacagcctttgagtctgctttctgcc
tctatggacaagaccatgatactttgggggccagaggaggagtcaggtgtgtgggtggag
caggtgcgtgtgggagaggtgggaggaaacacactaggcttctttggctgtcaaatggca
cccgatggctccaggattttggcacacgcctttcacggagcgctgcacctctggcaaaga
gacccaagccagaagagagagtggagtcctgcagtggtgttgtctggacactttaatgcc
gtgcaggacttgagctgggattcagagggagactttctccttagcgtgggctcagaccag
actaccagaatctttgcaccctggagaaggaaagactgctcacaggtcacctggcacgag
atcgccaggccacagatccacggctatgacatgcagtgcctggccatggtgggccgattc
ctgtttgtctctggagcagatgaaaaagtgctgcgcgtgttcaaggcgccacgtaacttt
gtggaaaacttcgccaacatagtgggcacctctctggagaaactcttggcctcacctgat
gctgcaggattaccagaaggagccagcataccagcactcggcctctctaataaggctgtg
tttcaaggtgatcttacggttcagagcactcaagaggaaggagaagatttcaacagagta
tctgaccagtacaaggaatcttactttcatcctctcagtttaacagaaccccctcctgag
gatcaccttcttcagaacacgctgtggcctgaggtccagaagctgtatggtcatggtttt
gagatgttctgtctggcgtctgactctgcacgaacagtggtcgcatcagcgtgtaaggca
tctaaagcagagcatgctgctatcctgttgtggagcaccactacctggaaacagctacaa
gctcttccatgccacagtctgactgtcactcagatggcattctcttcagactcgcgcttg
ctccttgctgtgtcccgagaccgcacctggtcattgtggagacgtgaggacagcggacca
gagacatcagatccaaagttcacgctttacacatgcaccagtaaggactcagccgtgcac
acgcgcatcatttggtcatgtgactggagccaggacaataaatacttcgttacagctagt
cgggataagaaggttataatgtggggtcaccatggctcgggagatccggtcggcatgaat
gagagtgcagttattccctgttcttctgctctggatgtgggcgattcagccactgctgtg
tctatctgccctttccttctgtctgaccaaagctaccttgtagcggtgggtctggagagc
ggacaaatcgttctgtataaatggagaccagcggacgatgtgtctttaggatcagactgg
agcaggtgtgccgaaacagatgtctcacaaagtcacaccctggtggtgaagagactgcgc
tggaggccccgagtctgtcagcaggatgagagtgaaggcttgaacaagcagcaccaaagc
acctccgttcagttagccagcgctggagctgaccacaccgtcaaaattttcaacatcaac
acactgactttgtag

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