Clarias gariepinus (North African catfish): 128518710
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Entry
128518710 CDS
T10780
Name
(RefSeq) sialoadhesin-like
KO
K06548
sialoadhesin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04514
Cell adhesion molecules
Brite
CD molecules [BR:
cgar04090
]
Proteins
128518710
Lectins [BR:
cgar04091
]
I-type lectins (Siglecs)
128518710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128518710
NCBI-ProteinID:
XP_053347928
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Position
3:41400518..42587517
Genome browser
AA seq
1683 aa
AA seq
DB search
MLLTGVEAQHSVTLSSKSLCAVTGSTVKIPCTFTTPPHFTVVKREWYRVQSSEGEPQDLS
TDPQYSGRVSVSTVTSDCELTVRNVSVNDSGVYNFRFKTQRRHWISASSRVRLTVTGVQS
KKCWGVTYTSKHVCALKGTSIDLSCSYKHPTGLTVLKNVWFIEKKGDVEPVDVREDEEYQ
GRVQYTHSSQNKCGLKITNLTERDTQTYKFRFYTDDPKGKYTGQYGVFLSVTDVKVTVSD
WRDQYMTLSCITTCTLSNNPTYIWYKNGQRVSDCKSASCSVAAVSGALSYSCAVEGHDSL
LSPPVCVGENCWAVTYTNIRVCALDGSSVEFAGSYSHPSDQRVNNVFWHSIQSRKDFLDL
RQETQFLNRVEYVNKDRDSNLKMIQVTKKDSGEYRLRIITNDRKGFSGRPGVVLNVTDLR
KTVADWPNWQLTLSCITSCTLSNNFTYVWYKNGQRVTDKLTKHNKLYLISFKDVGNYSCA
VRGHEDLRSPEQPKSYCLPHTKNCWGVTYTPEHVCALKGTSIDLSCSYKHPAGLTVLKSV
WFIKEQADGEPVDVREDEEYQGRVQYTQSSQNKCSLRITNLRKRDAQTYRFRFYTDDPKD
PKYTGEPGVPLSVTDLKVTVSDWRDQYMTLSCITTCTLSNNPTYIWYKNGQRVSDCKSAS
CSVAAVSGAVSYSCAVEGHDSLLSPPVYSPKNTRAVVLSSGDTVEGDSVTLSCSSDANPP
VLTYSWFKQRAAADTLLTTGQNYSISNISPQHSGLYYCTAHNQLGQHNSTPKLLNVLYSP
KNTSAVVLPSGDTVEGDSVTLSCSSDANPPVLNYTWFKQGVAADTLLTTGQNYSISNISS
QHSGLYYCTAHNQLGQHNSTPTLLDVLYSPKNTRAVVLSSGDTVEGDSVTLSCSSDANPP
VLTYSWFKKRAAANTLLTTGQNYSISSISSQHSGLYYCIARNQLGQQKSTPTLLDVFYSP
KNTRTVVLSSGDMVEGSSVTLSCCSDANPPVLTYSWFKQRAAADTLLTTGQNYSISNISS
QHSGLYYCTAHNKLGRHSSTPTLLNVLYPPKNTRAVVLSSGDTVEGDSVTLSCSSDANPP
VLNYSWFKQRAAADTLLTTGQNYSISSISSQHSGLYYCTAHNKLGQHNSTPTLLDVLYYP
KNTRAVVFPSGDTVEGDSVTLSCSSDANPPVLNYTWFKQRAAADTLLTTGQNYIISNISS
QHSGLYYCTAHNQLGQHNSTPTLLHVLDSPKNTRAVVLSSGDTVEGDSVTLSCSSDANPP
VLNFSWFKQRAAADTLLTTGQNYSIRNISSQHSGLYYCTAHNQLGQHNSTPTLLNVFYFY
SDSPKNTRAVVLSSEDTVEGDSVTLSCSSDANPTVLTYAWFKQRAASDTLLTTGQNYSIS
NINPQHSGLYYCTAHNQLGQHNSTPTELDVLYFPKNTRAVVLSSGDMMEGGSVTLSCSSD
ANPHVLTYSWFKQRAAADTLLTTGQNYSISSISSQHSGLYYCTAHNKLGRHSSTPTFLDV
LYSPKNTRAVVLSSGDTVEGDSVTLSCSSDANPPVLTYSWFKQRAAADTLLTTGQNYSIS
NISSQHSGLYYCTAHNQLGQHNSTPTLLDVLYFPKNTRAVVLSSGDTVEGDSVTLSCSSD
ANPTVLTYSWFKQRATADTLLTTGQNYSISNISSQHSGLYYCTAHNQLGQHNSTPTLLDV
LCK
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgttactgacaggtgttgaggctcagcacagtgtaactctctcctctaagagtctctgt
gctgttactggatctacagttaaaatcccctgtacatttacaacaccacctcacttcact
gttgtaaagagagagtggtatcgagtccagagctctgaaggagaaccacaagacctgagc
acagatccacaatactcaggacgagtgtctgtaagcacagtgacgtctgactgtgagctg
acagtgaggaatgtgagtgtgaatgactctggagtttataactttagatttaaaacacag
agacgtcactggatatcagcatcatctagagttcgtctgactgttacaggtgtacagagt
aaaaagtgttggggtgtgacttacacttctaaacatgtgtgtgctttgaaaggcacatca
attgatctctcctgctcttataaacatcctacaggccttactgtgctcaaaaatgtgtgg
ttcattgaaaaaaaaggtgatgttgagcctgtggatgtgagagaggatgaggagtatcag
ggccgagtgcagtacacacacagctcccagaataagtgtggtctgaaaatcactaacctg
acagagagagacactcaaacatacaaattcagattctacactgatgatcctaaaggaaag
tacacaggacaatatggagtctttctgtctgtcacagatgtgaaggttacagtatcagac
tggagagaccagtacatgacactgagctgtatcaccacctgcactctatctaacaacccc
acttacatctggtacaagaacggacagcgtgtgtctgactgtaaatctgcctcctgctct
gtagctgcagtcagtggtgcgctcagttacagctgtgctgttgaaggccatgacagtctc
ctctctcctccagtctgtgttggtgaaaactgttgggctgtgacctacacaaacataaga
gtctgtgctttggacggatcttcagtggagtttgctggaagttactcacatcccagtgat
cagagagttaataatgtattctggcattctattcagtcacgaaaggacttcctggacctg
aggcaggaaacacagtttttaaatcgagttgaatatgtgaacaaagacagagacagcaat
ttaaaaatgatccaggtgacaaagaaggactctggagaatatcgccttagaatcattact
aatgatagaaaaggattctctggtagacctggagtggtgttgaatgttacagacctccga
aaaactgtggcggactggccaaactggcagctaacgctgagctgcatcacctcttgcact
ctgtctaacaacttcacttacgtctggtacaagaacggacagcgtgttactgacaaactc
accaaacacaacaagctctacctgatttcctttaaagatgtaggcaactactcctgtgct
gtgagaggacatgaggatcttcgctctcctgaacaacctaaatcctattgccttcctcac
accaaaaattgttggggtgtgacttacactcctgaacatgtgtgtgccctgaaaggtaca
tcgattgatctctcctgctcctacaaacaccctgcaggactcacagtgttaaaatcagtc
tggttcattaaagagcaggctgatggtgagcctgtggatgtgagagaggatgaggagtat
cagggccgagtgcagtacacacagagctcccagaataaatgtagtctaagaatcactaac
ctgagaaagagagacgctcaaacatacagattcagattctacactgatgatcctaaagat
cctaaatacactggagaaccaggagtccctctgtctgttacagatctgaaggttacagta
tcagactggagagaccagtacatgacactgagctgtatcaccacctgcactctatctaac
aaccccacttacatctggtacaagaacggacagcgtgtgtctgactgtaaatctgcctcc
tgctctgtagctgcagtcagtggtgcggtcagttacagctgtgctgttgaaggccatgac
agtctcctctctcctccagtgtattcccctaaaaacaccagagcagtggttctttcctct
ggagacacagtggagggggattcagtgactctgagctgtagcagtgatgcaaaccctcca
gttctcacctactcctggtttaagcagagagcagctgcagacacactgctgacaacaggc
cagaattacagcatcagcaacatcagcccccagcacagcggactgtactactgcactgct
cacaaccagctgggacagcacaactccacaccaaaacttctaaatgttttatattcccct
aaaaacaccagtgcagtggttcttccctctggagacacagtggagggggattcagtgact
ctgagctgtagcagtgatgcaaaccctcctgttctcaactacacctggtttaagcaggga
gtagctgcagacacactgctgacaacaggccagaattacagcatcagcaacatcagctcc
cagcacagcggactgtactactgcactgctcacaaccagctgggacaacacaactccaca
ccaacactcctggatgtgttatattcccctaaaaacaccagagcagtggttctttcctct
ggagacacagtggagggagattcagtgactctgagctgtagcagtgatgcaaaccctcct
gttcttacctactcctggtttaagaagagagcagctgcaaacacactgctgacaacaggc
cagaattacagcatcagcagcatcagctcccagcacagcggactgtactactgcattgct
cgcaaccagctgggacagcaaaagtccacaccaacactcctggatgtgttttattcccct
aaaaacaccagaacagtggttctttcttccggtgacatggtggaaggaagttcagtgact
ctgagctgttgcagtgatgcaaaccctcctgttctcacctactcctggtttaagcagaga
gcagctgcagacacactgctgacaacaggccagaattacagcatcagcaacatcagctcc
cagcacagcggactgtactactgcactgctcacaacaagctgggacggcacagctccaca
ccaacactactaaatgtgttatatccccctaaaaacaccagagcagtggttctttcctct
ggagacacagtggagggggattcagtgactctgagctgtagcagtgatgcaaaccctcct
gttctcaactactcctggtttaaacagagagcagctgcagacacactgctgacaacaggc
cagaattacagcatcagcagcatcagctctcagcacagcggactgtactactgcactgct
cacaacaagctgggacagcacaactccacaccaacactcctggatgtgttgtattaccct
aaaaacaccagagcagtggtttttccctctggagacacagtggagggggattcagtgact
ctgagctgtagcagtgatgcaaaccctcctgttcttaattacacctggtttaagcaaaga
gcagctgcagacacactgctgacaacaggccagaattacatcatcagcaacatcagctcc
cagcacagcggactgtactactgcactgctcacaaccagctgggacagcacaactccaca
ccaacactcctgcatgtgttagactcccctaaaaacaccagagcagtggttctttcctct
ggagacacagtggagggggattcagtgactctgagctgtagcagtgatgcaaaccctcct
gttctcaacttctcctggtttaagcagagagcagctgcagacacactgctgacaacaggc
cagaattacagcatcaggaacatcagctcccagcacagcggactgtactactgcactgct
cacaaccagctgggacagcacaactccacaccaacactcctgaatgtgttttatttctac
tcagattcccctaaaaacaccagagcagtggttctttcctctgaagacacagtggagggg
gattcagtgactctgagctgtagcagtgatgcaaaccctactgttctcacctacgcctgg
tttaagcagagagcagcatcagacacactgctgacaacaggccagaattacagcatcagc
aacatcaacccccaacacagcggactgtactactgcactgctcacaaccagctggggcag
cacaactccacaccaacagaactggatgttttatatttccctaaaaacaccagagcagtg
gttctttcctccggagacatgatggaaggaggttcggtgactctgagctgtagcagtgat
gcaaatcctcatgttctcacctactcctggtttaagcagagagcagctgcagacacactg
ctgacaacaggccagaattacagcatcagcagtatcagctcccagcacagcggactgtac
tactgcactgctcacaacaagctgggacggcacagctccacaccaacattcctggatgta
ttatattcccctaaaaacaccagagcagtggttctttcctctggagacacagtggagggg
gattcagtgactctgagctgtagcagtgatgcaaaccctcctgttctcacctactcctgg
tttaagcagagagcagctgctgacacactgctgacaacaggccagaattacagcatcagc
aacatcagctcccagcacagcggactgtactactgcactgctcacaaccagctgggacag
cacaactccacaccaacactcctggatgtgttatatttccccaaaaacaccagagcagtg
gttctttcctctggagacacagtggagggggattcagtgactctgagctgtagcagtgat
gcaaaccctactgttctcacctactcctggtttaagcagagagcaactgcagacacactg
ctgacaacaggccagaattacagcatcagcaacatcagctcccagcacagcggactgtac
tactgcaccgctcacaaccagctgggacagcacaactccacaccaacactcctggatgtg
ttatgtaagtaa
DBGET
integrated database retrieval system
