Clarias gariepinus (North African catfish): 128518794
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Entry
128518794 CDS
T10780
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04020
Calcium signaling pathway
Brite
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128518794 (cacna1ha)
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Other DBs
NCBI-GeneID:
128518794
NCBI-ProteinID:
XP_053348049
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Position
3:complement(20938588..21041849)
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AA seq
2327 aa
AA seq
DB search
MTDGEGRERFEYLESGEVRVPVSVLYRAHGYGQAVEDEEKGSTWGRDGSEGSNSSGTRGS
GEDDDDDGAGGGGGGDGATAPDGASEEQEQQPYPALAPIVFFCIKQTTRPRSWCLRVVCN
PWFEHVSMLVILLNCVTLGMFQPCEDVQCQSEWCVILQAFDDCIFAFFAVEMVIKMIALG
IFGSKCYLGDTWNRLDFFIVMAGMLEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRIL
VTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDKNAKDLYNLSFMSPYF
MHEDGEEDPFICSAIINGMVKCTDVPRYREGEMECNLNASLGHTLSGPDTRNGCVNWNQY
YSECLPGESNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLI
IVGSFFMINLCLVVIATQFSETKQRENQLMQEQRARYMSNDSTLASYSEPGSCYEEMLRY
ISHLYRKVKRRAYRIYQGWQSKRRKKVNPNSGGLPGGGGANGHGRQRRGGGHWARSVHNL
VHHHQHHHCHLSNGSPSPQAIAESADVLEMRYITSGVQLTVPSQAPAGLDLSPGHQSVHS
IFQGDFQEAPQICTGSTAGVTPLGRLNGGMNYPTILPSFICSYTGSNVTAKGRTEANNST
ADVVESYEKLQRLTGEHSHRRLMLQMAGVEPTSLLFEVLGCPYCAQALENIDLDLADSDC
SQSEGEVVHEFSHRARFRLGHSRRHKKLEERGRLMRCWDNFRDRMKRIVDSKYFNRGIMI
AILINTLSMGIEYHEQPDELTDILEISNIVFTSMFVLEMIFKLMAFGLFGYIKNPYNIFD
GIIVVISVWEIIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCML
LMLFIFTFSILGMHLFGCKFSLRLENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLY
NGMASTSPLAALYFVALMSFGNYVLFNLLVAILVEGFQAEGDATKSDVDEEKRSVNFEEE
EKMGELRATELKMYSLMMSANGHVDSRGNLPPPIIMRTAATPMPTPKSSLGTDSIFSLEE
SRHGSRISIDPIGYDQRSQASPRKSPCHPCSSSSNWGSRRSSWNGLSRAPSLKRKDTSGE
RQSLLLGEGRGSFEDEEPEGLMLGKAGSASGGSLHHPSSLDYPELPTLPSLCPSGEYHDC
NGRALHLSTELPSELSREDSTDEDLDDSFCFRAKKILDAYKPKWCKSHEEWSLYIFSPRN
RFRVFCQRIISHKMFDHVVLVFIFLNCITIALERPHIQANSSERVFLSISNYVFTVIFVA
EMTVKVVALGLFSGKHSYLQSTWNVLDGVLVSVSLIDILVSMASTGGNKIFGILRVLRLL
RTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEG
LDTKNITNKSDCLQAKYKWIRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDQ
QPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRQRLL
EKRRRKAQQRPYYADYSPARLYIHTLCTNHYLDLFITFIICINVVTMSIEHYNQPLYLEE
ALKYCNYVFTVFFILEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIKMNAAL
PINPTIIRIMRVLRIARVLKLLKLATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALG
VELFGKLECTENNPCEGFSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECTPEDKQ
CLSYLPLVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIEMEMEMA
RRLSNASAMSSGGPEGRGGTYMGPRPHSPGQDERMQRTQGNFLSPRKMSVSRMHSLPNDS
YMFRPVRPASAPYPLQEVEPTQAYLELGSVTSIHSQPCEGHSLLQVPDVHPQPHISICMP
RIPSPNSSPLHVSGRPLRRQEAIKNDSIDVQMSDSKRNLDKHIRNTTVGVTHQVPRISAP
SSPLMSPFLPTYCHMPSVCPLQHPQHQRIVPHRSSSRASSSPSDSMFDSVDPADEEVHHI
NSSARLWAGVPAEGRCHSLSPYVTQWPLPVKNCTSATNLTHYSSKDKFFNVDSRGFLDKP
CCIEDHRRHSIEICSSADDGGFEQGVGEKRYLPTRGQSLHIQRKKKMSPPCISVEPPIET
VIPLSLVSMKKLSESTLLRRRTPSYELALQRDSLDFLEHQLPSQPLIKVERQPSHCGEYL
SLPRFPYHQSDSGSCILRDSSPSAQSSRYDAALEESTDFSTVNRTAQ
NT seq
6984 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatggcgaagggagagagcgctttgaatacctggagagtggagaggtgagagtc
ccggtgtcggtgttgtaccgagcgcacggttatggccaagctgttgaggatgaggagaaa
ggcagcacatggggccgagatggctctgaaggttcgaatagctctggaactcgaggctcg
ggtgaggatgatgatgatgatggtgctggtggtggtggtggtggtgatggtgccactgcg
cccgatggtgcgtccgaggagcaggagcagcagccgtaccctgcgctcgctcccatcgtc
tttttctgcatcaaacagaccacgcggccgcggagctggtgcctccgggtggtttgtaac
ccctggttcgagcatgtaagcatgctggttatcctcctgaactgtgtgaccctgggcatg
ttccagccctgcgaggacgtccagtgccagtctgagtggtgtgtcatccttcaggcattc
gatgactgcatctttgcctttttcgctgtggagatggttatcaagatgatagctctgggg
attttcggatctaagtgttaccttggagacacatggaatcgcctggactttttcattgtc
atggctgggatgctggagtactcactggatggtcacaatgccagcctgtctgccatccgg
actgtgcgtgtgctccggcctctacgagccatcaacagagtccccagtatgaggatactg
gtgactctgctcctagatactctgcctatgttaggcaacgtcctcctgctgtgctttttt
gtcttctttatattcggcatagtcggggtgcagctttgggctggtcttctaaggaacagg
tgtttcctggacaaaaatgcgaaggatctgtataatctgtccttcatgagtccatatttc
atgcacgaggatggcgaggaggaccccttcatctgctccgctataattaacggcatggtc
aagtgtacggacgtgcctcgttacagggagggtgagatggagtgcaacctaaacgcatcc
ctcggacacaccttgtctggtcctgataccaggaacggttgcgtgaactggaaccagtac
tacagcgagtgtctgcccggggagtctaaccctcacaaaggggctgtgaactttgacaat
attggatatgcttggattgctattttccaggttatcactttggagggatgggtggacatc
atgtattatgttatggatgcccattccttttacaattttatatattttatattgcttatt
atagttggttctttcttcatgatcaatttgtgcctggttgtgatcgcaacccagttctca
gaaactaagcagcgagagaaccagctgatgcaggagcagcgtgcgcgctacatgtccaat
gacagcacactggccagctactcggagcctggcagctgttatgaggagatgctcaggtac
atcagccatctgtaccgcaaggtgaagcgtcgcgcataccggatctaccaaggctggcag
agcaagcggaggaagaaggttaaccccaacagtggcggcttgccagggggtggaggggcc
aacgggcacggcaggcagcggagaggtggtgggcactgggcgcgttctgtgcacaacctt
gtccaccaccaccagcaccaccactgtcatctcagcaatggcagcccgagccctcaggcc
atagcagaaagcgccgatgttctggagatgaggtatattacatcaggagtacagttaaca
gtaccctcacaggcacctgctgggttggatctttcaccaggacaccagtcggtgcatagc
atctttcagggtgactttcaggaggccccgcagatttgcacaggctccacggctggtgtg
acacctctggggagacttaacggaggcatgaactatcctaccattttgccatccttcatc
tgcagctatacaggcagcaacgtcacagccaaagggagaaccgaggccaacaacagcaca
gcagatgtggtggagtcgtatgagaaactacagcgtctcacaggagagcacagtcacaga
cgcctgatgctgcagatggcaggcgtggagccgacctctctgctctttgaggttctcggg
tgcccatactgtgcccaggctctggagaacatcgacctcgacctggctgactccgactgc
tcccagtccgaaggcgaggtggtgcatgagttttcccacagagccaggtttagactcgga
cactcgcgtcgccacaagaagctagaggagcgcggccgattgatgcgttgctgggacaac
ttccgagacaggatgaaacgcatagtggatagcaagtactttaaccgtgggattatgatt
gccatccttatcaacacgctgagcatggggatagagtatcatgagcagcctgacgaactg
acagatattctggagattagcaatatcgtcttcaccagcatgtttgtccttgagatgatc
ttcaagctgatggcctttggcctcttcggatacatcaaaaacccgtataatatctttgat
ggaatcattgttgtcataagtgtatgggagattatcggacaggctgatgggggtctttcc
gtgctcaggaccttccgtctcttgcgtgtgctcaagctggtgcgcttcctacctgctctt
cggagacagctggtggttttgatgaagacgatggataacgtggccaccttctgcatgttg
ctcatgctcttcatcttcaccttcagtattcttggaatgcatctgtttggctgcaaattc
agcctgaggttggagaatggagataccatcccagacagaaagaactttgactctctgctg
tgggccatcgtcactgtgtttcagatactaactcaggaggactggaatgtggtcctctat
aacggaatggcttccacctctccgctggctgcactttactttgtggcgctgatgagcttt
gggaactatgtcctgtttaaccttctcgttgcaatcttggtggagggctttcaagcagag
ggcgatgccaccaagtctgacgtggatgaggagaagaggtcagttaattttgaagaagag
gagaagatgggagaattacgtgccacagagctgaagatgtattctctgatgatgtctgca
aatggacatgtggactctcgtggtaatttgccgccaccgatcatcatgcgcacagccgca
acccctatgcccacacccaagagctctcttggcacagactccattttcagtttagaggaa
tcgaggcatggcagtcggatttccattgatccgatcggttacgatcagagatcacaggcc
agtccacgcaaatcaccctgccacccttgtagctcaagcagtaactggggcagccgcagg
tcgagctggaacggcctgagtcgggcgcctagtctgaagaggaaggacacgtctggcgag
aggcagtctctgctcttgggtgagggaaggggcagctttgaggatgaagagccagaggga
ctcatgttgggaaaagccggaagtgccagcggtggttctctgcaccaccccagttctctg
gactaccctgagctacccacactccccagcctgtgcccatcaggagagtaccatgactgc
aacggcagggcgttacacctgtccacagagctgccctcggagctcagccgggaggactct
accgatgaagatctagatgacagtttctgtttccgcgcgaagaagattctggacgcgtat
aaacccaagtggtgtaaaagtcacgaggagtggtctctctatatattctctccaaggaac
aggtttcgcgtgttttgccagaggatcatctcgcacaagatgtttgaccatgtggtctta
gtctttatcttccttaactgcatcactatcgctctggagaggccacacattcaggccaac
agctcggagcgagtgttcctcagtatttccaattatgtattcactgtgatatttgttgct
gaaatgactgtgaaggtggtggctcttggcctcttttcaggaaaacatagctatctgcag
agcacctggaacgtgttggatggagtgctggtgtctgtctcactcattgatatcctggtg
tccatggcgtccactggagggaacaagatctttggtattctgagggtcctgcgtctcctc
aggacgctcaggcctttaagagtgatcagtcgtgctcctggactgaagctggtggttgaa
acgttgataacgtcactgaggcccattgggaacatcgtactgatctgctgtgctttcttt
attgtctttggcattcttggcgttcagctcttcaaaggcaagttttaccactgtgaaggt
ttggacacaaagaacatcacaaataaatcagattgcctgcaggccaaatacaaatggatt
cggagaaagtacaactttgataatttggggcaggctctcatgtcgctgtttgtgctatct
tgtaaggacggctgggtgaatattatgtacgatggtctggacgctgttggagtggaccag
cagccggtacgtaaccacaacccctggatgctgctttacttcatctccttcctgctgatc
gtgagcttcttcgtgctgaacatgttcgtcggcgtggtggtggagaacttccacaagtgt
cggcaggaccaggaagaggaggaggcgcgcctgcgcgaggagaagaggcagcggttgctg
gagaaaaggcgcaggaaagcgcagcagaggccctactacgcagattactcaccagcccgg
ctctacatccacacactgtgcactaaccactacctggacctctttatcaccttcatcatc
tgcatcaacgtggtcaccatgtccatagagcactacaaccagcccctgtatcttgaggaa
gctttgaagtactgcaactacgtcttcaccgtcttcttcatcttagaggcccttctcaaa
cttgtagcttttggcttccggagattcttcaaagacagatggaaccagttagatctggcc
attgtgcttctctccatcatgggcatcacactggaggagatcaagatgaacgctgccctt
cccatcaaccccactatcatccgtatcatgagggttttaagaatagcccgagttttgaag
ctgttgaagttggctacaggcatgagagcattgctggacactgtgatgcaggctctacca
caggttgggaatctgggcttgctctttatgctcctgttcttcatctatgccgcgctcggc
gttgagcttttcgggaaattggaatgcactgagaataatccatgtgagggattcagtcgc
catgccacatttgagaactttggaatggcctttctaaccctcttcagagtttcaactggg
gacaattggaacggtataatgaaggacactttaagggagtgcaccccagaagataagcaa
tgcctgagctacctgcccttggtttcccctatatactttgtcacctttgtgctgatggcc
cagtttgtgctggtgaacgttgtggtggctgtgctgatgaagcaccttgaggagagcaat
aaagaggccaaggaggacgctgaaatggatgcggagatcgagatggagatggaaatggcc
cggcgtctcagtaacgcctcggccatgagctccggcggcccggaaggcaggggcggcacc
tacatggggcccaggccacattctccaggacaggatgaacggatgcagagaactcagggg
aattttctatctccacgaaagatgtcggtgtccaggatgcactctttgcctaatgacagt
tacatgtttcggccggtgaggccggccagcgcaccgtaccctttgcaggaagtagagccg
actcaagcgtacctagaattgggctcagtgacctcgatccactcgcagccgtgtgaaggt
cattccttgctccaggttcctgacgttcatcctcaaccccatattagtatttgtatgccg
aggatccccagtccaaactcgtctcccctgcatgtttcaggcaggcctctacgcagacag
gaagcgatcaagaatgactcgattgatgtgcagatgagtgactctaaaagaaacttggac
aaacatattaggaatacaacagtcggtgtcacccaccaggtgccacggatctccgccccc
agcagccccctgatgtctcctttcttacccacttattgccacatgcccagtgtctgcccc
ctccaacaccctcagcaccagaggatcgttccccatcgatcatccagccgggccagcagc
agccccagcgactccatgtttgactcagtcgacccagccgacgaggaggtccatcacatc
aacagctcagcccggctgtgggccggagtcccggcggaggggcgttgccactcgttgtcc
ccctacgtcacacagtggccactgcctgtgaagaactgcacgagtgccaccaatcttact
cactacagttctaaagacaagttcttcaatgtggatagcagggggtttctggacaagccc
tgttgcatcgaggatcaccggcggcactctattgagatctgctcttctgcagacgacggc
gggttcgagcagggagttggtgaaaagaggtaccttcccacgcgcggacaatcgcttcac
atccagaggaagaagaagatgagtcccccgtgtatctccgtcgaacctcctatagaaaca
gtgatcccgctgtctctcgtgtccatgaagaaactgtccgagagcacgctcctgcggcga
cggacgccgtcttacgagctggccctgcagcgcgactccctggacttcctggagcaccaa
cttcccagtcagcctctcatcaaagtggagaggcagccctcacactgtggcgaatatctc
tctctcccacggttcccctaccaccagtcagactccggttcctgcatcctgcgtgacagc
agcccgtctgcacagtcctctcgctacgacgccgcgctggaggagtccacagatttcagc
acagtaaacaggactgctcagtga
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integrated database retrieval system
